RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 HRKO00198 91 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 GUCY1B2O75343 617 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 SNX4O95219 450 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 CELA3AP09093 270 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 COL6A2P12110 1019 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 PIK3R1P27986 724 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 RPP38P78345 283 aaKnown RBP17.35■□□□□ 0.37
CCDC43-205ENST00000592333 FUT7Q11130 342 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 TSNAXIP1Q2TAA8 658 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 GGTA1PQ4G0N0 100 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 TECRLQ5HYJ1 363 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 PAGE2Q7Z2X7 111 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 RNF175Q8N4F7 328 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 OR7G1Q8NGA0 311 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 NEIL3Q8TAT5 605 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 GAL3ST4Q96RP7 486 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 PROK2Q9HC23 129 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 CNOT11Q9UKZ1 510 aaKnown RBP17.35■□□□□ 0.37
CCDC43-205ENST00000592333 RNF11Q9Y3C5 154 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 EML6Q6ZMW3 1958 aa17.35■□□□□ 0.37
CCDC43-205ENST00000592333 A0A0G2JNJ9 132 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 C2orf92A0A1B0GVN3 265 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 HSPB2A8KAH6 182 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 TRIM3O75382 744 aaPredicted RBP17.34■□□□□ 0.37
CCDC43-205ENST00000592333 AIFM1O95831 613 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 MAGEA12P43365 314 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 SERPINB9P50453 376 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 NRG3P56975 720 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 RPS6KA2Q15349 733 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 HSPB2Q16082 182 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 HLA-DQA1Q5Y7H0 255 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 FRG2Q64ET8 278 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 TMEM198Q66K66 360 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 C8orf74Q6P047 294 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 SYT10Q6XYQ8 523 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 GALNT12Q8IXK2 581 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 INTS1Q8N201 2190 aaKnown RBP17.34■□□□□ 0.37
CCDC43-205ENST00000592333 FAM13CQ8NE31 585 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 ATP6V1E2Q96A05 226 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 FRG2BQ96QU4 278 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 DOHHQ9BU89 302 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 NOL11Q9H8H0 719 aaKnown RBP17.34■□□□□ 0.37
CCDC43-205ENST00000592333 Q9UFV3 132 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 MTRF1LQ9UGC7 380 aaKnown RBP17.34■□□□□ 0.37
CCDC43-205ENST00000592333 ITGB1BP2Q9UKP3 347 aa17.34■□□□□ 0.37
CCDC43-205ENST00000592333 LRRC3CA6NJW4 275 aa17.33■□□□□ 0.36
CCDC43-205ENST00000592333 CLPSP04118 112 aa17.33■□□□□ 0.36
CCDC43-205ENST00000592333 CD1EP15812 388 aa17.33■□□□□ 0.36
CCDC43-205ENST00000592333 NAGAP17050 411 aa17.33■□□□□ 0.36
CCDC43-205ENST00000592333 ENDOUP21128 410 aaKnown RBP17.33■□□□□ 0.36
CCDC43-205ENST00000592333 CNTFP26441 200 aa17.33■□□□□ 0.36
CCDC43-205ENST00000592333 CCNG1P51959 295 aa17.33■□□□□ 0.36
CCDC43-205ENST00000592333 C6orf163Q5TEZ5 329 aa17.33■□□□□ 0.36
CCDC43-205ENST00000592333 TMEM81Q6P7N7 255 aa17.33■□□□□ 0.36
CCDC43-205ENST00000592333 TAOK1Q7L7X3 1001 aa17.33■□□□□ 0.36
CCDC43-205ENST00000592333 PM20D2Q8IYS1 436 aa17.33■□□□□ 0.36
CCDC43-205ENST00000592333 LIX1Q8N485 282 aa17.33■□□□□ 0.36
CCDC43-205ENST00000592333 OR10G3Q8NGC4 313 aa17.33■□□□□ 0.36
CCDC43-205ENST00000592333 OR4K14Q8NGD5 310 aa17.33■□□□□ 0.36
CCDC43-205ENST00000592333 SREK1Q8WXA9 508 aaKnown RBP17.33■□□□□ 0.36
CCDC43-205ENST00000592333 LRRC46Q96FV0 321 aa17.33■□□□□ 0.36
CCDC43-205ENST00000592333 ZNF597Q96LX8 424 aa17.33■□□□□ 0.36
CCDC43-205ENST00000592333 CPSF2Q9P2I0 782 aaKnown RBP17.33■□□□□ 0.36
CCDC43-205ENST00000592333 CFL2Q9Y281 166 aa17.33■□□□□ 0.36
CCDC43-205ENST00000592333 NPFFR2Q9Y5X5 522 aa17.33■□□□□ 0.36
CCDC43-205ENST00000592333 AKAP9Q99996 3911 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 GLOD5A6NK44 160 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 OR7A17O14581 309 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 PRKRAO75569 313 aaKnown RBP17.32■□□□□ 0.36
CCDC43-205ENST00000592333 KRT38O76015 456 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 SIX3O95343 332 aaPredicted RBP17.32■□□□□ 0.36
CCDC43-205ENST00000592333 RFPL3SP0C7P2 107 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 TIMP3P35625 211 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 NEK2P51955 445 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 IFT88Q13099 833 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 UAP1Q16222 522 aaPredicted RBP17.32■□□□□ 0.36
CCDC43-205ENST00000592333 PRAMEF20Q5VT98 475 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 PACS2Q86VP3 889 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 ULK2Q8IYT8 1036 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 ZNF615Q8N8J6 731 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 PTGR2Q8N8N7 351 aaPredicted RBP17.32■□□□□ 0.36
CCDC43-205ENST00000592333 SPPL2AQ8TCT8 520 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 SLC44A1Q8WWI5 657 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 DIO2Q92813 273 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 ADIPOR1Q96A54 375 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 ANGPTL4Q9BY76 406 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 OR10A5Q9H207 317 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 VPS11Q9H270 941 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 NMRK1Q9NWW6 199 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 SPRR3Q9UBC9 169 aa17.32■□□□□ 0.36
CCDC43-205ENST00000592333 FOXD3Q9UJU5 478 aaPredicted RBP17.32■□□□□ 0.36
CCDC43-205ENST00000592333 C1orf226A1L170 272 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 LRRC14BA6NHZ5 514 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 GOLGA6L10A6NI86 522 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 SMIM24O75264 130 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 EPPINO95925 133 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 HPNP05981 417 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 INHBAP08476 426 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 ADH7P40394 386 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 XKP51811 444 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms