RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 DPM1O60762 260 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 CATP04040 527 aaKnown RBP7.08□□□□□ -1.28
VMP1-213ENST00000591877 EIF2S1P05198 315 aaKnown RBP7.08□□□□□ -1.28
VMP1-213ENST00000591877 ERVK-10P10266 1014 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 PGAM1P18669 254 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 MMP11P24347 488 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 IMPA1P29218 277 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 CMPK1P30085 196 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 EFNA3P52797 238 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 PGGT1BP53609 377 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 CDKN2DP55273 166 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 PRDX1Q06830 199 aaKnown RBP7.08□□□□□ -1.28
VMP1-213ENST00000591877 Q0VFX4 171 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 PTK6Q13882 451 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 PPP1R7Q15435 360 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 INPP5JQ15735 1006 aaPredicted RBP7.08□□□□□ -1.28
VMP1-213ENST00000591877 HKDC1Q2TB90 917 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 BTBD16Q32M84 506 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 TTLL9Q3SXZ7 439 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 RBM20Q5T481 1227 aaKnown RBP7.08□□□□□ -1.28
VMP1-213ENST00000591877 CRIP3Q6Q6R5 217 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 KIRREL2Q6UWL6 708 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 PIWIL4Q7Z3Z4 852 aaKnown RBP7.08□□□□□ -1.28
VMP1-213ENST00000591877 TBC1D1Q86TI0 1168 aaPredicted RBP7.08□□□□□ -1.28
VMP1-213ENST00000591877 TRABD2AQ86V40 505 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 KCNMB4Q86W47 210 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 LMNTD2Q8IXW0 634 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 GALNT16Q8N428 558 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 RAB42Q8N4Z0 105 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 AMER2Q8N7J2 671 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 TTC29Q8NA56 475 aaPredicted RBP7.08□□□□□ -1.28
VMP1-213ENST00000591877 SUN3Q8TAQ9 357 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 GRK7Q8WTQ7 553 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 EEF1AKMT1Q8WVE0 214 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 INPP5DQ92835 1189 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 DVL3Q92997 716 aaPredicted RBP7.08□□□□□ -1.28
VMP1-213ENST00000591877 C3orf49Q96BT1 292 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 FER1L6-AS2Q96M78 137 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 GNRHR2Q96P88 292 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 OR2A5Q96R48 311 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 NDNQ99608 321 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 EBNA1BP2Q99848 306 aaKnown RBP7.08□□□□□ -1.28
VMP1-213ENST00000591877 ZNF304Q9HCX3 659 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 MRPS30Q9NP92 439 aaKnown RBP7.08□□□□□ -1.28
VMP1-213ENST00000591877 FAM114A2Q9NRY5 505 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 C5AR2Q9P296 337 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 ANKMY1Q9P2S6 941 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 PCYOX1Q9UHG3 505 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 USP22Q9UPT9 525 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 MRPS2Q9Y399 296 aaKnown RBP7.08□□□□□ -1.28
VMP1-213ENST00000591877 HIVEP3Q5T1R4 2406 aa7.08□□□□□ -1.28
VMP1-213ENST00000591877 ESPL1Q14674 2120 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 NAV2Q8IVL1 2488 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 CPAMD8Q8IZJ3 1885 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 SCN2AQ99250 2005 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 IGLV3-12A0A075B6K2 115 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 GOLGA6L10A0A0M3HER8 536 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 GXYLT2A0PJZ3 443 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 PEX12O00623 359 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 HAT1O14929 419 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 GPR42O15529 346 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 P2RX6O15547 441 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 FOXS1O43638 330 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 VPS26AO75436 327 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 ERN1O75460 977 aaKnown RBP7.07□□□□□ -1.28
VMP1-213ENST00000591877 TSPAN12O95859 305 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 SYF2O95926 243 aaKnown RBP7.07□□□□□ -1.28
VMP1-213ENST00000591877 PLATP00750 562 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 ENO3P13929 434 aaPredicted RBP7.07□□□□□ -1.28
VMP1-213ENST00000591877 TCP1P17987 556 aaKnown RBP7.07□□□□□ -1.28
VMP1-213ENST00000591877 GNLYP22749 145 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 RPA3P35244 121 aaPredicted RBP7.07□□□□□ -1.28
VMP1-213ENST00000591877 HSD17B2P37059 387 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 ELK3P41970 407 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 KLC1Q07866 573 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 TSTA3Q13630 321 aaPredicted RBP7.07□□□□□ -1.28
VMP1-213ENST00000591877 PHKG1Q16816 387 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 TBRG1Q3YBR2 411 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 VWA2Q5GFL6 755 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 SPANXN3Q5MJ09 141 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 VWA5B1Q5TIE3 1220 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 DGAT2L7PQ6IED9 249 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 IGFL3Q6UXB1 125 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 MBOAT1Q6ZNC8 495 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 HPS6Q86YV9 775 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 PLD3Q8IV08 490 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 CNTN4Q8IWV2 1026 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 PRSS58Q8IYP2 241 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 ADGRG5Q8IZF4 528 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 AMER3Q8N944 861 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 CLEC1AQ8NC01 280 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 OR11G2Q8NGC1 345 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 CEP70Q8NHQ1 597 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 PNPLA2Q96AD5 504 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 NACC2Q96BF6 587 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 C19orf60Q96EN9 201 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 CERS2Q96G23 380 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 CAPZA3Q96KX2 299 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 CCDC68Q9H2F9 335 aa7.07□□□□□ -1.28
VMP1-213ENST00000591877 ABCF3Q9NUQ8 709 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms