RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 MDGA2Q7Z553 956 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 ADAMTSL2Q86TH1 951 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 ZC3HC1Q86WB0 502 aaKnown RBP8.75□□□□□ -1.01
BRCA1-226ENST00000591534 SCUBE1Q8IWY4 988 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 KLHDC8AQ8IYD2 350 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 TCAIMQ8N3R3 496 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 CELF2-AS1Q8N7Q2 184 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 ANKRD53Q8N9V6 530 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 MORN4Q8NDC4 146 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 SRFBP1Q8NEF9 429 aaKnown RBP8.75□□□□□ -1.01
BRCA1-226ENST00000591534 OR8K3Q8NH51 312 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 OR14A16Q8NHC5 309 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 NCLNQ969V3 563 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 ISL2Q96A47 359 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 SARAFQ96BY9 339 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 APOPT1Q96IL0 206 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 FANCD2OSQ96PS1 177 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 DEFB127Q9H1M4 99 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 NT5DC2Q9H857 520 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 KCNK9Q9NPC2 374 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 INTS9Q9NV88 658 aaKnown RBP8.75□□□□□ -1.01
BRCA1-226ENST00000591534 GPRC5BQ9NZH0 403 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 MYOTQ9UBF9 498 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 TNFRSF10DQ9UBN6 386 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 COPS7AQ9UBW8 275 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 TBK1Q9UHD2 729 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 ACAD8Q9UKU7 415 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 CCDC168Q8NDH2 2452 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 SCN3AQ9NY46 2000 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 HIVEP1P15822 2718 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 MEGF11A6BM72 1044 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 NKX2-6A6NCS4 301 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 LRIT2A6NDA9 550 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 SLC22A31A6NKX4 558 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 TRIM49D1C9J1S8 452 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 NPIPA2E9PIF3 369 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 NPIPA3F8WFD2 350 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 H3BQF6 201 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 CLGNO14967 610 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 BIRC5O15392 142 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 ZNHIT1O43257 154 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 RRP9O43818 475 aaKnown RBP8.74□□□□□ -1.01
BRCA1-226ENST00000591534 SUSD5O60279 629 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 CTNSO60931 367 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 WDR1O75083 606 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 DNAJB6O75190 326 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 WDR47O94967 919 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 C1QAP02745 245 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 P04436 131 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 NEFHP12036 1026 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 GABRA1P14867 456 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 TAC1P20366 129 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 CNR1P21554 472 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 ZFP36L2P47974 494 aaKnown RBP8.74□□□□□ -1.01
BRCA1-226ENST00000591534 MTTPP55157 894 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 ATP6V0D1P61421 351 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 FOLH1Q04609 750 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 SLC18A2Q05940 514 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 BIKQ13323 160 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 SLC10A1Q14973 349 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 SLC25A35Q3KQZ1 300 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 PAGE2BQ5JRK9 111 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 WLSQ5T9L3 541 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 MROH9Q5TGP6 573 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 ATG16L1Q676U5 607 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 ZNF585AQ6P3V2 769 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 SBSNQ6UWP8 590 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 FAM47EQ6ZV65 393 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.74□□□□□ -1.01
BRCA1-226ENST00000591534 UBE3DQ7Z6J8 389 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 FAM109AQ8N4B1 249 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 OR2L5Q8NG80 312 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 OR2M7Q8NG81 312 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 OR52N2Q8NGI0 321 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 OR2W6PQ8NHA6 318 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 UHMK1Q8TAS1 419 aaKnown RBP8.74□□□□□ -1.01
BRCA1-226ENST00000591534 NINJ1Q92982 152 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 SERINC2Q96SA4 455 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 MCMBPQ9BTE3 642 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 UCK2Q9BZX2 261 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 REXO4Q9GZR2 422 aaKnown RBP8.74□□□□□ -1.01
BRCA1-226ENST00000591534 WNT10AQ9GZT5 417 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 MRPL18Q9H0U6 180 aaKnown RBP8.74□□□□□ -1.01
BRCA1-226ENST00000591534 VPS11Q9H270 941 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 EHD1Q9H4M9 534 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 KLHL31Q9H511 634 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 LDAHQ9H6V9 325 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 EXO5Q9H790 373 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 ZDHHC11Q9H8X9 412 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 IL1RL2Q9HB29 575 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 NMRAL1Q9HBL8 299 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 SACM1LQ9NTJ5 587 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 MRGBPQ9NV56 204 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.74□□□□□ -1.01
BRCA1-226ENST00000591534 CTNNAL1Q9UBT7 734 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 OARD1Q9Y530 152 aa8.74□□□□□ -1.01
BRCA1-226ENST00000591534 SCN2AQ99250 2005 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 FAM95CA0A1B0GW59 222 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 FAM166BA8MTA8 275 aa8.73□□□□□ -1.01
BRCA1-226ENST00000591534 WWP2O00308 870 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms