RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 VTI1BQ9UEU0 232 aa16.72■□□□□ 0.27
VAT1-208ENST00000590924 PHF11Q9UIL8 331 aa16.72■□□□□ 0.27
VAT1-208ENST00000590924 FIS1Q9Y3D6 152 aa16.72■□□□□ 0.27
VAT1-208ENST00000590924 FAM227AF5H4B4 570 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 PIP5K1BO14986 540 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 GUCY1B2O75343 617 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 EEDO75530 441 aaKnown RBP16.71■□□□□ 0.27
VAT1-208ENST00000590924 FAM58BPP0C7Q3 252 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 LINC00032P0C843 101 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 MAOAP21397 527 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 CERS1P27544 350 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 TPP2P29144 1249 aaPredicted RBP16.71■□□□□ 0.27
VAT1-208ENST00000590924 HMGCS1Q01581 520 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 ACSM2AQ08AH3 577 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 C3AR1Q16581 482 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 XKR7Q5GH72 579 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 SPDYAQ5MJ70 313 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 CCNYL2Q5T2Q4 361 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 ZNF468Q5VIY5 522 aaPredicted RBP16.71■□□□□ 0.27
VAT1-208ENST00000590924 ACSM2BQ68CK6 577 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 XKRXQ6PP77 449 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 CYP20A1Q6UW02 462 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 GPR180Q86V85 440 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 SIAH3Q8IW03 269 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 DDIASQ8IXT1 998 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 LRRC34Q8IZ02 419 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 C1orf52Q8N6N3 182 aaKnown RBP16.71■□□□□ 0.27
VAT1-208ENST00000590924 NFAM1Q8NET5 270 aaPredicted RBP16.71■□□□□ 0.27
VAT1-208ENST00000590924 AGR3Q8TD06 166 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 TSPAN10Q9H1Z9 355 aaPredicted RBP16.71■□□□□ 0.27
VAT1-208ENST00000590924 CHST11Q9NPF2 352 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 C1orf109Q9NX04 203 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 MCM8Q9UJA3 840 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 TINAGQ9UJW2 476 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 MRPS33Q9Y291 106 aaKnown RBP16.71■□□□□ 0.27
VAT1-208ENST00000590924 WBP11Q9Y2W2 641 aaKnown RBP16.71■□□□□ 0.27
VAT1-208ENST00000590924 TMED5Q9Y3A6 229 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 ASB4Q9Y574 426 aa16.71■□□□□ 0.27
VAT1-208ENST00000590924 SYNDIG1LA6NDD5 238 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 NPIPA5E9PKD4 350 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 CYR61O00622 381 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 CLDN4O14493 209 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 NME2P1O60361 137 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 SLC25A12O75746 678 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 KLK1P06870 262 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 AGAP20933 346 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 NME2P22392 152 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 TLX1P31314 330 aaPredicted RBP16.7■□□□□ 0.26
VAT1-208ENST00000590924 TRHRP34981 398 aaPredicted RBP16.7■□□□□ 0.26
VAT1-208ENST00000590924 CYB561P49447 251 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 MLF1P58340 268 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 ADORA2A-AS1P86434 159 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 KIAA0040Q15053 153 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 ZNF630Q2M218 657 aaPredicted RBP16.7■□□□□ 0.26
VAT1-208ENST00000590924 SMU1Q2TAY7 513 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 SPPL2CQ8IUH8 684 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 MCEMP1Q8IX19 187 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 ZNF595Q8IYB9 648 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 PIWIL2Q8TC59 973 aaKnown RBP16.7■□□□□ 0.26
VAT1-208ENST00000590924 APIPQ96GX9 242 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 PPP3R2Q96LZ3 170 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 MAPKAP1Q9BPZ7 522 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 SORBS1Q9BX66 1292 aaKnown RBP16.7■□□□□ 0.26
VAT1-208ENST00000590924 LRTM1Q9HBL6 345 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 NECTIN3Q9NQS3 549 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 PNPOQ9NVS9 261 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 NPIPA1Q9UND3 350 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 MMACHCQ9Y4U1 282 aa16.7■□□□□ 0.26
VAT1-208ENST00000590924 HCFC1P51610 2035 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 CSMD1Q96PZ7 3565 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 LSM1O15116 133 aaKnown RBP16.69■□□□□ 0.26
VAT1-208ENST00000590924 HDAC3O15379 428 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 PROM1O43490 865 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 ASNA1O43681 348 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 TMPRSS11DO60235 418 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 SEC22BO75396 215 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 MYO1DO94832 1006 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 CPN2P22792 545 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 HTR1EP28566 365 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 PTGER4P35408 488 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 BUD31P41223 144 aaPredicted RBP16.69■□□□□ 0.26
VAT1-208ENST00000590924 HLCSP50747 726 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 HSD17B7P56937 341 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 BIKQ13323 160 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 TERF2Q15554 542 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 MAPKAPK3Q16644 382 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 FAM219BQ5XKK7 198 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.69■□□□□ 0.26
VAT1-208ENST00000590924 ZNF227Q86WZ6 799 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 GHDCQ8N2G8 530 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 APCDD1LQ8NCL9 501 aa16.69■□□□□ 0.26
VAT1-208ENST00000590924 TRPC5OSA6NMA1 111 aa16.68■□□□□ 0.26
VAT1-208ENST00000590924 FCHO1O14526 889 aa16.68■□□□□ 0.26
VAT1-208ENST00000590924 ESRRAP11474 423 aaPredicted RBP16.68■□□□□ 0.26
VAT1-208ENST00000590924 ZNF24P17028 368 aa16.68■□□□□ 0.26
VAT1-208ENST00000590924 TIA1P31483 386 aaKnown RBP eCLIP16.68■□□□□ 0.26
VAT1-208ENST00000590924 MAPK12P53778 367 aa16.68■□□□□ 0.26
VAT1-208ENST00000590924 RAE1P78406 368 aaKnown RBP16.68■□□□□ 0.26
VAT1-208ENST00000590924 BTKQ06187 659 aa16.68■□□□□ 0.26
VAT1-208ENST00000590924 NOXRED1Q6NXP6 359 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms