RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 NDUFA9Q16795 377 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 DUSP7Q16829 419 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 ZNF404Q494X3 552 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 TOR1AIP1Q5JTV8 583 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 OR4C11Q6IEV9 310 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 CASP12Q6UXS9 341 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 TMC5Q6UXY8 1006 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 ZNF367Q7RTV3 350 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 ZBTB46Q86UZ6 589 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 PSMA8Q8TAA3 256 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 SNRNP27Q8WVK2 155 aaKnown RBP7.01□□□□□ -1.29
ZNF540-206ENST00000589117 MOAP1Q96BY2 351 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 ZFYVE19Q96K21 471 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 ZNF354BQ96LW1 612 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 PRAP1Q96NZ9 151 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 NIPSNAP1Q9BPW8 284 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 TEX101Q9BY14 249 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 UCK2Q9BZX2 261 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 CCDC86Q9H6F5 360 aaKnown RBP7.01□□□□□ -1.29
ZNF540-206ENST00000589117 CXorf36Q9H7Y0 433 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 DDX31Q9H8H2 851 aaKnown RBP7.01□□□□□ -1.29
ZNF540-206ENST00000589117 SFXN1Q9H9B4 322 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 NMNAT1Q9HAN9 279 aaPredicted RBP7.01□□□□□ -1.29
ZNF540-206ENST00000589117 AKIP1Q9NQ31 210 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 PRSS16Q9NQE7 514 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 FKBP14Q9NWM8 211 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 MS4A12Q9NXJ0 267 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 THAP10Q9P2Z0 257 aaPredicted RBP7.01□□□□□ -1.29
ZNF540-206ENST00000589117 PNMA8BQ9ULN7 279 aaPredicted RBP7.01□□□□□ -1.29
ZNF540-206ENST00000589117 PLAGL1Q9UM63 463 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 A0A1W2PQU0 124 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 TOR1BO14657 336 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 PCDH17O14917 1159 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 SLC28A2O43868 658 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 MFN2O95140 757 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 SERPIND1P05546 499 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 H1F0P07305 194 aaKnown RBP7.01□□□□□ -1.29
ZNF540-206ENST00000589117 NR2F1P10589 423 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 OSMP13725 252 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 POU2F1P14859 743 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 PORP16435 677 aaPredicted RBP7.01□□□□□ -1.29
ZNF540-206ENST00000589117 CBLP22681 906 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 POU1F1P28069 291 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 C21orf33P30042 268 aaPredicted RBP7.01□□□□□ -1.29
ZNF540-206ENST00000589117 FRKP42685 505 aaPredicted RBP7.01□□□□□ -1.29
ZNF540-206ENST00000589117 LIMS1P48059 325 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 RAB28P51157 221 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 BCAP31P51572 246 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 UGT2B15P54855 530 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 NCS1P62166 190 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 ABATP80404 500 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 TGM3Q08188 693 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 DMPKQ09013 629 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 ILKQ13418 452 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 TP53BP2Q13625 1128 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 RUNX3Q13761 415 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 GANABQ14697 944 aaKnown RBP7.01□□□□□ -1.29
ZNF540-206ENST00000589117 SYT16Q17RD7 645 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 TBC1D25Q3MII6 688 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 TNFAIP8L2Q6P589 184 aaPredicted RBP7.01□□□□□ -1.29
ZNF540-206ENST00000589117 TSEN54Q7Z6J9 526 aaKnown RBP7.01□□□□□ -1.29
ZNF540-206ENST00000589117 PLA2G15Q8NCC3 412 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 OR9Q2Q8NGE9 314 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 FGF13Q92913 245 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 EXOSC8Q96B26 276 aaKnown RBP7.01□□□□□ -1.29
ZNF540-206ENST00000589117 TMEM19Q96HH6 336 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 BBS4Q96RK4 519 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 SMAD5Q99717 465 aaKnown RBP7.01□□□□□ -1.29
ZNF540-206ENST00000589117 CDCA4Q9BXL8 241 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 MROQ9BYG7 248 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 SPNS1Q9H2V7 528 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 OSGEPL1Q9H4B0 414 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 TRIM45Q9H8W5 580 aaPredicted RBP7.01□□□□□ -1.29
ZNF540-206ENST00000589117 TRPV4Q9HBA0 871 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 AMBNQ9NP70 447 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 GIMAP4Q9NUV9 329 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 RLIMQ9NVW2 624 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 SLC23A2Q9UGH3 650 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 OSGIN1Q9UJX0 560 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 KCND3Q9UK17 655 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 HEBP2Q9Y5Z4 205 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 SLC35F4A4IF30 521 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 SNTNA6NMZ2 147 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 ZAR1LA6NP61 321 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 H3BN98 237 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 OR10H3O60404 316 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 UGT2B17O75795 530 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 KAT7O95251 611 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 SCGB1D2O95969 90 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 GASTP01350 101 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 APODP05090 189 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 STSP08842 583 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 HSMCR30P0CW71 290 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 PIPP12273 146 aaPredicted RBP7□□□□□ -1.29
ZNF540-206ENST00000589117 CHMP24386 653 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 IDUAP35475 653 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 TRIM23P36406 574 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 IFNGR2P38484 337 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 IL12RB1P42701 662 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 TSFMP43897 325 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms