RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ACTR3BQ9P1U1 418 aa20.89■□□□□ 0.94
ATG4D-209ENST00000588857 ATP1B1P05026 303 aa20.89■□□□□ 0.93
ATG4D-209ENST00000588857 CCL4P13236 92 aa20.89■□□□□ 0.93
ATG4D-209ENST00000588857 GZMMP51124 257 aa20.89■□□□□ 0.93
ATG4D-209ENST00000588857 PRR5P85299 388 aa20.89■□□□□ 0.93
ATG4D-209ENST00000588857 FADDQ13158 208 aa20.89■□□□□ 0.93
ATG4D-209ENST00000588857 RIPK1Q13546 671 aa20.89■□□□□ 0.93
ATG4D-209ENST00000588857 LTB4RQ15722 352 aa20.89■□□□□ 0.93
ATG4D-209ENST00000588857 C6orf120Q7Z4R8 191 aa20.89■□□□□ 0.93
ATG4D-209ENST00000588857 GLRX5Q86SX6 157 aa20.89■□□□□ 0.93
ATG4D-209ENST00000588857 PROSER1Q86XN7 944 aa20.89■□□□□ 0.93
ATG4D-209ENST00000588857 MICU2Q8IYU8 434 aa20.89■□□□□ 0.93
ATG4D-209ENST00000588857 C10orf111Q8N326 155 aa20.89■□□□□ 0.93
ATG4D-209ENST00000588857 ADCY4Q8NFM4 1077 aa20.89■□□□□ 0.93
ATG4D-209ENST00000588857 ELP4Q96EB1 424 aa20.89■□□□□ 0.93
ATG4D-209ENST00000588857 EPS8L2Q9H6S3 715 aa20.89■□□□□ 0.93
ATG4D-209ENST00000588857 MKKSQ9NPJ1 570 aaPredicted RBP20.89■□□□□ 0.93
ATG4D-209ENST00000588857 SLC39A1Q9NY26 324 aa20.89■□□□□ 0.93
ATG4D-209ENST00000588857 MAGEL2Q9UJ55 1249 aa20.89■□□□□ 0.93
ATG4D-209ENST00000588857 ARPC2O15144 300 aa20.88■□□□□ 0.93
ATG4D-209ENST00000588857 EMC8O43402 210 aa20.88■□□□□ 0.93
ATG4D-209ENST00000588857 SLC35E2P0CK97 266 aa20.88■□□□□ 0.93
ATG4D-209ENST00000588857 CDK4P11802 303 aa20.88■□□□□ 0.93
ATG4D-209ENST00000588857 MC3RP41968 323 aa20.88■□□□□ 0.93
ATG4D-209ENST00000588857 MAP7Q14244 749 aa20.88■□□□□ 0.93
ATG4D-209ENST00000588857 FXNQ16595 210 aa20.88■□□□□ 0.93
ATG4D-209ENST00000588857 CDCP2Q5VXM1 449 aa20.88■□□□□ 0.93
ATG4D-209ENST00000588857 ERICH5Q6P6B1 374 aa20.88■□□□□ 0.93
ATG4D-209ENST00000588857 CYP2R1Q6VVX0 501 aa20.88■□□□□ 0.93
ATG4D-209ENST00000588857 SPATA24Q86W54 205 aa20.88■□□□□ 0.93
ATG4D-209ENST00000588857 OR56A1Q8NGH5 318 aa20.88■□□□□ 0.93
ATG4D-209ENST00000588857 SLC26A7Q8TE54 656 aa20.88■□□□□ 0.93
ATG4D-209ENST00000588857 KAT2AQ92830 837 aa20.88■□□□□ 0.93
ATG4D-209ENST00000588857 RNF31Q96EP0 1072 aa20.88■□□□□ 0.93
ATG4D-209ENST00000588857 TMEM121BQ9BXQ6 578 aaPredicted RBP20.88■□□□□ 0.93
ATG4D-209ENST00000588857 TOR4AQ9NXH8 423 aa20.88■□□□□ 0.93
ATG4D-209ENST00000588857 MYOCOSA0A1B0GUC4 107 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 SPAARA0A1B0GVQ0 90 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 B4E171 279 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 OR10H2O60403 315 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 JRKO75564 520 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 SLITRK5O94991 958 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 BMP10O95393 424 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 NT5EP21589 574 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 TSPAN7P41732 249 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 MVDP53602 400 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 PRKAG1P54619 331 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 CASP9P55211 416 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 BTG2P78543 158 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 ISXQ2M1V0 245 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 COX20Q5RI15 118 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 MFSD4BQ5TF39 518 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 CPZQ66K79 652 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 GLYATQ6IB77 296 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 MED25Q71SY5 747 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 SLC38A9Q8NBW4 561 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 ALOXE3Q9BYJ1 711 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 GPATCH2Q9NW75 528 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 LOXL2Q9Y4K0 774 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 MMACHCQ9Y4U1 282 aa20.87■□□□□ 0.93
ATG4D-209ENST00000588857 CPNE3O75131 537 aaKnown RBP20.86■□□□□ 0.93
ATG4D-209ENST00000588857 CSO75390 466 aaKnown RBP20.86■□□□□ 0.93
ATG4D-209ENST00000588857 MT-CO3P00414 261 aa20.86■□□□□ 0.93
ATG4D-209ENST00000588857 ETFAP13804 333 aa20.86■□□□□ 0.93
ATG4D-209ENST00000588857 NCK1P16333 377 aa20.86■□□□□ 0.93
ATG4D-209ENST00000588857 GGT1P19440 569 aa20.86■□□□□ 0.93
ATG4D-209ENST00000588857 MAOAP21397 527 aa20.86■□□□□ 0.93
ATG4D-209ENST00000588857 PRIM2P49643 509 aa20.86■□□□□ 0.93
ATG4D-209ENST00000588857 IGLV3-21P80748 117 aaPredicted RBP20.86■□□□□ 0.93
ATG4D-209ENST00000588857 DCDP81605 110 aaKnown RBP20.86■□□□□ 0.93
ATG4D-209ENST00000588857 BIKQ13323 160 aa20.86■□□□□ 0.93
ATG4D-209ENST00000588857 MINDY4Q4G0A6 757 aa20.86■□□□□ 0.93
ATG4D-209ENST00000588857 NKAIN1Q4KMZ8 207 aa20.86■□□□□ 0.93
ATG4D-209ENST00000588857 FBXW10Q5XX13 1052 aa20.86■□□□□ 0.93
ATG4D-209ENST00000588857 LCN8Q6JVE9 175 aa20.86■□□□□ 0.93
ATG4D-209ENST00000588857 RBM18Q96H35 190 aaKnown RBP20.86■□□□□ 0.93
ATG4D-209ENST00000588857 RSRC1Q96IZ7 334 aaKnown RBP20.86■□□□□ 0.93
ATG4D-209ENST00000588857 SLC35G5Q96KT7 338 aa20.86■□□□□ 0.93
ATG4D-209ENST00000588857 CHST8Q9H2A9 424 aa20.86■□□□□ 0.93
ATG4D-209ENST00000588857 LANCL2Q9NS86 450 aa20.86■□□□□ 0.93
ATG4D-209ENST00000588857 DDX18Q9NVP1 670 aaKnown RBP20.86■□□□□ 0.93
ATG4D-209ENST00000588857 FAF1Q9UNN5 650 aaPredicted RBP20.86■□□□□ 0.93
ATG4D-209ENST00000588857 PLOD2O00469 737 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 ATP6V1G2O95670 118 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 MRPS35P82673 323 aaKnown RBP20.85■□□□□ 0.93
ATG4D-209ENST00000588857 SERTAD2Q14140 314 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 GCNT6Q5T4J0 391 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 DHRS13Q6UX07 377 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 RAB11FIP2Q7L804 512 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 SPPL2CQ8IUH8 684 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 ST13P4Q8IZP2 240 aaPredicted RBP20.85■□□□□ 0.93
ATG4D-209ENST00000588857 NUP43Q8NFH3 380 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 FIG4Q92562 907 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 PTCHD1Q96NR3 888 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 DGAT2Q96PD7 388 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 DEPDC7Q96QD5 511 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 PTGFRNQ9P2B2 879 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 OR2W5A6NFC9 320 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 CXCR6O00574 342 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 ATP6V1B2P21281 511 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms