RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 KCNJ10P78508 379 aa18.65■□□□□ 0.58
TRIM47-204ENST00000587339 MRPS35P82673 323 aaKnown RBP18.65■□□□□ 0.58
TRIM47-204ENST00000587339 VLDLRP98155 873 aa18.65■□□□□ 0.58
TRIM47-204ENST00000587339 ID2Q02363 134 aa18.65■□□□□ 0.58
TRIM47-204ENST00000587339 NR0B2Q15466 257 aa18.65■□□□□ 0.58
TRIM47-204ENST00000587339 SDCCAG3Q96C92 435 aa18.65■□□□□ 0.58
TRIM47-204ENST00000587339 OSBPL11Q9BXB4 747 aa18.65■□□□□ 0.58
TRIM47-204ENST00000587339 ANKRA2Q9H9E1 313 aa18.65■□□□□ 0.58
TRIM47-204ENST00000587339 DDX18Q9NVP1 670 aaKnown RBP18.65■□□□□ 0.58
TRIM47-204ENST00000587339 RAB23Q9ULC3 237 aa18.65■□□□□ 0.58
TRIM47-204ENST00000587339 ABCG2Q9UNQ0 655 aa18.65■□□□□ 0.58
TRIM47-204ENST00000587339 PI4KAP42356 2102 aa18.65■□□□□ 0.58
TRIM47-204ENST00000587339 BDP1A6H8Y1 2624 aa18.65■□□□□ 0.58
TRIM47-204ENST00000587339 TMEM229AB2RXF0 380 aa18.64■□□□□ 0.58
TRIM47-204ENST00000587339 PATE3B3GLJ2 98 aa18.64■□□□□ 0.58
TRIM47-204ENST00000587339 G3V2T6 193 aa18.64■□□□□ 0.58
TRIM47-204ENST00000587339 SIGLEC6O43699 453 aa18.64■□□□□ 0.58
TRIM47-204ENST00000587339 PGM3O95394 542 aa18.64■□□□□ 0.58
TRIM47-204ENST00000587339 NSA2O95478 260 aaKnown RBP18.64■□□□□ 0.58
TRIM47-204ENST00000587339 GPR75O95800 540 aa18.64■□□□□ 0.58
TRIM47-204ENST00000587339 PNLIPP16233 465 aa18.64■□□□□ 0.58
TRIM47-204ENST00000587339 GRM7Q14831 915 aa18.64■□□□□ 0.58
TRIM47-204ENST00000587339 OTUD3Q5T2D3 398 aaPredicted RBP18.64■□□□□ 0.58
TRIM47-204ENST00000587339 MAGEE2Q8TD90 523 aaPredicted RBP18.64■□□□□ 0.58
TRIM47-204ENST00000587339 YIPF4Q9BSR8 244 aa18.64■□□□□ 0.58
TRIM47-204ENST00000587339 CAPN10Q9HC96 672 aa18.64■□□□□ 0.58
TRIM47-204ENST00000587339 ZNF451Q9Y4E5 1061 aa18.64■□□□□ 0.58
TRIM47-204ENST00000587339 PCDH15Q96QU1 1955 aa18.64■□□□□ 0.57
TRIM47-204ENST00000587339 CPED1A4D0V7 1026 aa18.64■□□□□ 0.57
TRIM47-204ENST00000587339 FITM1A5D6W6 292 aa18.64■□□□□ 0.57
TRIM47-204ENST00000587339 E2F6O75461 281 aa18.64■□□□□ 0.57
TRIM47-204ENST00000587339 IST1P53990 364 aa18.64■□□□□ 0.57
TRIM47-204ENST00000587339 RPS26P11Q5JNZ5 115 aaPredicted RBP18.64■□□□□ 0.57
TRIM47-204ENST00000587339 STK32CQ86UX6 486 aa18.64■□□□□ 0.57
TRIM47-204ENST00000587339 METTL25Q8N6Q8 603 aa18.64■□□□□ 0.57
TRIM47-204ENST00000587339 OR7G2Q8NG99 324 aa18.64■□□□□ 0.57
TRIM47-204ENST00000587339 SPPL2AQ8TCT8 520 aa18.64■□□□□ 0.57
TRIM47-204ENST00000587339 MIPOL1Q8TD10 442 aa18.64■□□□□ 0.57
TRIM47-204ENST00000587339 NR1H4Q96RI1 486 aaPredicted RBP18.64■□□□□ 0.57
TRIM47-204ENST00000587339 SPRTNQ9H040 489 aaPredicted RBP18.64■□□□□ 0.57
TRIM47-204ENST00000587339 EQTNQ9NQ60 294 aa18.64■□□□□ 0.57
TRIM47-204ENST00000587339 HCN3Q9P1Z3 774 aa18.64■□□□□ 0.57
TRIM47-204ENST00000587339 PLOD2O00469 737 aa18.63■□□□□ 0.57
TRIM47-204ENST00000587339 SLC28A2O43868 658 aa18.63■□□□□ 0.57
TRIM47-204ENST00000587339 ATP1B1P05026 303 aa18.63■□□□□ 0.57
TRIM47-204ENST00000587339 RNH1P13489 461 aaKnown RBP18.63■□□□□ 0.57
TRIM47-204ENST00000587339 PPP2R1BP30154 601 aa18.63■□□□□ 0.57
TRIM47-204ENST00000587339 TRIM61Q5EBN2 209 aa18.63■□□□□ 0.57
TRIM47-204ENST00000587339 OR2T5Q6IEZ7 315 aa18.63■□□□□ 0.57
TRIM47-204ENST00000587339 GUSBP11Q6P575 273 aa18.63■□□□□ 0.57
TRIM47-204ENST00000587339 TBPL2Q6SJ96 375 aa18.63■□□□□ 0.57
TRIM47-204ENST00000587339 PIWIL3Q7Z3Z3 882 aaKnown RBP18.63■□□□□ 0.57
TRIM47-204ENST00000587339 SVOPLQ8N434 492 aa18.63■□□□□ 0.57
TRIM47-204ENST00000587339 OR2T29Q8NH02 315 aa18.63■□□□□ 0.57
TRIM47-204ENST00000587339 OTUB1Q96FW1 271 aaPredicted RBP18.63■□□□□ 0.57
TRIM47-204ENST00000587339 C7orf34Q96L11 122 aa18.63■□□□□ 0.57
TRIM47-204ENST00000587339 NUDT22Q9BRQ3 303 aa18.63■□□□□ 0.57
TRIM47-204ENST00000587339 SEMA5BQ9P283 1151 aa18.63■□□□□ 0.57
TRIM47-204ENST00000587339 U3KQV3 271 aa18.63■□□□□ 0.57
TRIM47-204ENST00000587339 ARID1BQ8NFD5 2236 aaPredicted RBP18.63■□□□□ 0.57
TRIM47-204ENST00000587339 VPS13AQ96RL7 3174 aa18.63■□□□□ 0.57
TRIM47-204ENST00000587339 A8MU76 341 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 CASC3O15234 703 aaKnown RBP18.62■□□□□ 0.57
TRIM47-204ENST00000587339 OR2B3O76000 313 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 PDE9AO76083 593 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 NR2F1P10589 423 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 AVPR1BP47901 424 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 MAPK11Q15759 364 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 SYPL1Q16563 259 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 INAVAQ3KP66 663 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 IFI44LQ53G44 452 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 NHSL2Q5HYW2 709 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 PRSS42Q7Z5A4 293 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 D2HGDHQ8N465 521 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 SMYD1Q8NB12 490 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 MMABQ96EY8 250 aaPredicted RBP18.62■□□□□ 0.57
TRIM47-204ENST00000587339 C16orf58Q96GQ5 468 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 TREX2Q9BQ50 279 aaPredicted RBP18.62■□□□□ 0.57
TRIM47-204ENST00000587339 NTMQ9P121 344 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 PTGFRNQ9P2B2 879 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 SLC6A14Q9UN76 642 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 MRPS33Q9Y291 106 aaKnown RBP18.62■□□□□ 0.57
TRIM47-204ENST00000587339 PADI2Q9Y2J8 665 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 TMEM150CB9EJG8 249 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 DIRAS1O95057 198 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 CER1O95813 267 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 ARSFP54793 590 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 EMP3P54852 163 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 TXNL4AP83876 142 aaKnown RBP18.62■□□□□ 0.57
TRIM47-204ENST00000587339 PPP1R8Q12972 351 aaKnown RBP18.62■□□□□ 0.57
TRIM47-204ENST00000587339 PDK3Q15120 406 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 FAM214AQ32MH5 1076 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 ZNF528Q3MIS6 628 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 FAM111BQ6SJ93 734 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 KMT5CQ86Y97 462 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 ARMC8Q8IUR7 673 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 LGI4Q8N135 537 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 OR2L13Q8N349 312 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 MARVELD2Q8N4S9 558 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 EID2Q8N6I1 236 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms