RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 ANKDD1BA6NHY2 528 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 OR5K4A6NMS3 321 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 EEDO75530 441 aaKnown RBP9.67□□□□□ -0.86
SS18-221ENST00000582448 CDH1P12830 882 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 ME2P23368 584 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 TACR1P25103 407 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 PTX3P26022 381 aaPredicted RBP9.67□□□□□ -0.86
SS18-221ENST00000582448 CMPK1P30085 196 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 PIK3CBP42338 1070 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 ASMTP46597 345 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 MTTPP55157 894 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 MRPL49Q13405 166 aaKnown RBP9.67□□□□□ -0.86
SS18-221ENST00000582448 DNASE1L3Q13609 305 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 E2F2Q14209 437 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 RBBP5Q15291 538 aaKnown RBP9.67□□□□□ -0.86
SS18-221ENST00000582448 SAMD4BQ5PRF9 694 aaKnown RBP9.67□□□□□ -0.86
SS18-221ENST00000582448 CATSPEREQ5SY80 951 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 DUS1LQ6P1R4 473 aaKnown RBP9.67□□□□□ -0.86
SS18-221ENST00000582448 TMIGD1Q6UXZ0 262 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 ADCK2Q7Z695 626 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 FUNDC1Q8IVP5 155 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 LAS2Q8IYD9 372 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 OR52E1Q8NGJ3 308 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 HMGCLL1Q8TB92 370 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 WDR20Q8TBZ3 569 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 PROKR1Q8TCW9 393 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 ZFPM2Q8WW38 1151 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 LCN9Q8WX39 176 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 PRPF18Q99633 342 aaKnown RBP9.67□□□□□ -0.86
SS18-221ENST00000582448 ACAT2Q9BWD1 397 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 DENND2DQ9H6A0 471 aaPredicted RBP9.67□□□□□ -0.86
SS18-221ENST00000582448 KIR3DX1Q9H7L2 352 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 DCLRE1BQ9H816 532 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 RMND5AQ9H871 391 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 SLC7A8Q9UHI5 535 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 WDR37Q9Y2I8 494 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 TSC22D4Q9Y3Q8 395 aa9.67□□□□□ -0.86
SS18-221ENST00000582448 NOTCH2Q04721 2471 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 FLNCQ14315 2725 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 KIR2DS5A0A0G2JLQ3 304 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 A0A0G2JNG1 304 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 GNG14A0A1W2PPG7 69 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 ARGFXA6NJG6 315 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 OR52A4PA6NMU1 304 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 KIR2DS3K7RE56 304 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 FBP2O00757 339 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 KIF1CO43896 1103 aaKnown RBP9.66□□□□□ -0.86
SS18-221ENST00000582448 FKBP6O75344 327 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 PDE5AO76074 875 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 UBXN7O94888 489 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 VIPP01282 170 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 DBHP09172 617 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 BCKDHAP12694 445 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 F3P13726 295 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 DDX5P17844 614 aaKnown RBP9.66□□□□□ -0.86
SS18-221ENST00000582448 CAPN3P20807 821 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 PRPS1L1P21108 318 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 PKLRP30613 574 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 HPCAL1P37235 193 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 RPL3P39023 403 aaKnown RBP9.66□□□□□ -0.86
SS18-221ENST00000582448 PGDP52209 483 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 CLDN8P56748 225 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 RPS18P62269 152 aaKnown RBP9.66□□□□□ -0.86
SS18-221ENST00000582448 AP2B1P63010 937 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 KIR2DS5Q14953 304 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 KPNB1Q14974 876 aaKnown RBP9.66□□□□□ -0.86
SS18-221ENST00000582448 TIGD2Q4W5G0 525 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 ICE2Q659A1 982 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 CPZQ66K79 652 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 NOXRED1Q6NXP6 359 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 PGM2L1Q6PCE3 622 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 FAM199XQ6PEV8 388 aaPredicted RBP9.66□□□□□ -0.86
SS18-221ENST00000582448 FAM92BQ6ZTR7 304 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 C2orf73Q8N5S3 287 aaPredicted RBP9.66□□□□□ -0.86
SS18-221ENST00000582448 AVL9Q8NBF6 648 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 TTLQ8NG68 377 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 HUS1BQ8NHY5 278 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 CT55Q8WUE5 264 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 SLC13A3Q8WWT9 602 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 CCDC124Q96CT7 223 aaKnown RBP9.66□□□□□ -0.86
SS18-221ENST00000582448 CLPTM1LQ96KA5 538 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 QRFPRQ96P65 431 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 SH3GL1Q99961 368 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 TRIM15Q9C019 465 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 SRMSQ9H3Y6 488 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 NT5DC2Q9H857 520 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 SLAMF7Q9NQ25 335 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 LHX9Q9NQ69 397 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 SIDT1Q9NXL6 827 aaKnown RBP9.66□□□□□ -0.86
SS18-221ENST00000582448 OR6C2Q9NZP2 312 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 SRPK3Q9UPE1 567 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 EMC9Q9Y3B6 208 aa9.66□□□□□ -0.86
SS18-221ENST00000582448 SPTAN1Q13813 2472 aaKnown RBP9.65□□□□□ -0.86
SS18-221ENST00000582448 SPENQ96T58 3664 aaKnown RBP9.65□□□□□ -0.86
SS18-221ENST00000582448 ARHGAP10A1A4S6 786 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 A8MUI8 341 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 MAGEB17A8MXT2 336 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 ENTPD5O75356 428 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 KCNH1O95259 989 aa9.65□□□□□ -0.86
SS18-221ENST00000582448 ANXA4P09525 319 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms