RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 FRMD7Q6ZUT3 714 aa18.02■□□□□ 0.48
SREBF1-220ENST00000581707 GALNT12Q8IXK2 581 aa18.02■□□□□ 0.48
SREBF1-220ENST00000581707 PCNX1Q96RV3 2341 aa18.02■□□□□ 0.48
SREBF1-220ENST00000581707 OXSMQ9NWU1 459 aa18.02■□□□□ 0.48
SREBF1-220ENST00000581707 MCM8Q9UJA3 840 aa18.02■□□□□ 0.48
SREBF1-220ENST00000581707 TINAGQ9UJW2 476 aa18.02■□□□□ 0.48
SREBF1-220ENST00000581707 UNC79Q9P2D8 2635 aa18.02■□□□□ 0.47
SREBF1-220ENST00000581707 PINLYPA6NC86 204 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 G3V3Y1 287 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 H3BQF6 201 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 ERAL1O75616 437 aaKnown RBP18.01■□□□□ 0.47
SREBF1-220ENST00000581707 NADKO95544 446 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-220ENST00000581707 P04436 131 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 CT62P0C5K7 136 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 ABOP16442 354 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 PTGER1P34995 402 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 ALDH9A1P49189 494 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 FOXA1P55317 472 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 PLGLB1Q02325 96 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 ACSM2AQ08AH3 577 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 IFFO1Q0D2I5 559 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 FUT7Q11130 342 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 SPIN4Q56A73 249 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 ACSM2BQ68CK6 577 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 MTFR2Q6P444 385 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 RIBC1Q8N443 379 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-220ENST00000581707 AENQ8WTP8 325 aaKnown RBP18.01■□□□□ 0.47
SREBF1-220ENST00000581707 KLHL29Q96CT2 875 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 FAM173AQ9BQD7 235 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 SACM1LQ9NTJ5 587 aa18.01■□□□□ 0.47
SREBF1-220ENST00000581707 RYDENQ9NUL5 291 aaKnown RBP18.01■□□□□ 0.47
SREBF1-220ENST00000581707 A0A0G2JMM0 328 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 C2orf92A0A1B0GVN3 265 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 A0A1W2PPB8 328 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 GNG14A0A1W2PPG7 69 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 A0A1W2PRS3 328 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 SERTM1A2A2V5 107 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 KIR3DP1A8MWS1 328 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 ZNHIT1O43257 154 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 PCDH7O60245 1069 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 CRCPO75575 148 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 CCL3P10147 92 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 CSNK2A2P19784 350 aaPredicted RBP18■□□□□ 0.47
SREBF1-220ENST00000581707 FEN1P39748 380 aaKnown RBP18■□□□□ 0.47
SREBF1-220ENST00000581707 PPIAP62937 165 aaKnown RBP18■□□□□ 0.47
SREBF1-220ENST00000581707 RAE1P78406 368 aaKnown RBP18■□□□□ 0.47
SREBF1-220ENST00000581707 BTKQ06187 659 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 CMPK2Q5EBM0 449 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 LIPMQ5VYY2 423 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 SLC22A10Q63ZE4 541 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 WDR93Q6P2C0 686 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 EMBQ6PCB8 327 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 LYPD8Q6UX82 237 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 GK5Q6ZS86 529 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 FAM47EQ6ZV65 393 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 CHERPQ8IWX8 916 aaKnown RBP18■□□□□ 0.47
SREBF1-220ENST00000581707 DND1Q8IYX4 353 aaKnown RBP18■□□□□ 0.47
SREBF1-220ENST00000581707 ZNF615Q8N8J6 731 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 OR7G1Q8NGA0 311 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 OR52N2Q8NGI0 321 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 SPACA9Q96E40 222 aaPredicted RBP18■□□□□ 0.47
SREBF1-220ENST00000581707 APIPQ96GX9 242 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 CCDC120Q96HB5 630 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 OR10A5Q9H207 317 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 NOL12Q9UGY1 213 aaKnown RBP eCLIP18■□□□□ 0.47
SREBF1-220ENST00000581707 MID2Q9UJV3 735 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 DLGAP4Q9Y2H0 992 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 ZNF780BQ9Y6R6 833 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 V9GYY5 206 aaPredicted RBP18■□□□□ 0.47
SREBF1-220ENST00000581707 NBPF19A0A087WUL8 3843 aa18■□□□□ 0.47
SREBF1-220ENST00000581707 CDC40O60508 579 aaKnown RBP eCLIP17.99■□□□□ 0.47
SREBF1-220ENST00000581707 ATP1B1P05026 303 aa17.99■□□□□ 0.47
SREBF1-220ENST00000581707 ESRRAP11474 423 aaPredicted RBP17.99■□□□□ 0.47
SREBF1-220ENST00000581707 DRD2P14416 443 aa17.99■□□□□ 0.47
SREBF1-220ENST00000581707 COL8A1P27658 744 aa17.99■□□□□ 0.47
SREBF1-220ENST00000581707 SERPINB3P29508 390 aa17.99■□□□□ 0.47
SREBF1-220ENST00000581707 SPDYAQ5MJ70 313 aa17.99■□□□□ 0.47
SREBF1-220ENST00000581707 HLA-DQA1Q5Y7H0 255 aa17.99■□□□□ 0.47
SREBF1-220ENST00000581707 RGS9BPQ6ZS82 235 aa17.99■□□□□ 0.47
SREBF1-220ENST00000581707 FGD2Q7Z6J4 655 aa17.99■□□□□ 0.47
SREBF1-220ENST00000581707 TRABD2AQ86V40 505 aa17.99■□□□□ 0.47
SREBF1-220ENST00000581707 SLC22A16Q86VW1 577 aa17.99■□□□□ 0.47
SREBF1-220ENST00000581707 TAGAPQ8N103 731 aa17.99■□□□□ 0.47
SREBF1-220ENST00000581707 TP53INP1Q96A56 240 aa17.99■□□□□ 0.47
SREBF1-220ENST00000581707 IQCGQ9H095 443 aaKnown RBP17.99■□□□□ 0.47
SREBF1-220ENST00000581707 DEFB127Q9H1M4 99 aa17.99■□□□□ 0.47
SREBF1-220ENST00000581707 SH2D2AQ9NP31 389 aa17.99■□□□□ 0.47
SREBF1-220ENST00000581707 HEY2Q9UBP5 337 aa17.99■□□□□ 0.47
SREBF1-220ENST00000581707 PLLPQ9Y342 182 aa17.99■□□□□ 0.47
SREBF1-220ENST00000581707 ZNF407Q9C0G0 2248 aa17.99■□□□□ 0.47
SREBF1-220ENST00000581707 A0A1B0GTH9 108 aa17.98■□□□□ 0.47
SREBF1-220ENST00000581707 FAM166BA8MTA8 275 aa17.98■□□□□ 0.47
SREBF1-220ENST00000581707 ACOT7O00154 380 aa17.98■□□□□ 0.47
SREBF1-220ENST00000581707 PRRG2O14669 202 aa17.98■□□□□ 0.47
SREBF1-220ENST00000581707 PDE9AO76083 593 aa17.98■□□□□ 0.47
SREBF1-220ENST00000581707 IL3P08700 152 aa17.98■□□□□ 0.47
SREBF1-220ENST00000581707 FBXO45P0C2W1 286 aa17.98■□□□□ 0.47
SREBF1-220ENST00000581707 S1PR1P21453 382 aa17.98■□□□□ 0.47
SREBF1-220ENST00000581707 TIA1P31483 386 aaKnown RBP eCLIP17.98■□□□□ 0.47
SREBF1-220ENST00000581707 PTGS2P35354 604 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms