RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 EXOC7Q9UPT5 735 aa2.26□□□□□ -2.05
SMCHD1-206ENST00000581631 TRIOBPQ9H2D6 2365 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 IGHV3OR16-12A0A075B7B8 117 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 IGHV3-35A0A0C4DH35 117 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 A4D1N5 150 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 MEI4A8MW99 385 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 STBD1O95210 358 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 PRAMEF12O95522 483 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 GAS8O95995 478 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 SLC35E2P0CK97 266 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 TKTL1P51854 596 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 HSPA14Q0VDF9 509 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 GIT2Q14161 759 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 NFE2L1Q14494 772 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 RPS6KA1Q15418 735 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 MEP1BQ16820 701 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 APOOLQ6UXV4 268 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 TMEM126BQ8IUX1 230 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 FBXO16Q8IX29 292 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 UBQLNLQ8IYU4 475 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 FAM46BQ96A09 425 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 NTMT1Q9BV86 223 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 IKZF5Q9H5V7 419 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 Q9HAA7 133 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 PLSCR3Q9NRY6 295 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 MRTO4Q9UKD2 239 aaKnown RBP2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 MOKQ9UQ07 419 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 KCNK6Q9Y257 313 aa2.25□□□□□ -2.05
SMCHD1-206ENST00000581631 A0A0A6YYC8 382 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 C13orf42A0A1B0GVH6 325 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 SLC15A5A6NIM6 579 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 I3L1I5 382 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 SLC33A1O00400 549 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 GPAA1O43292 621 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 GOT2P00505 430 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 MMP10P09238 476 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 SBK2P0C263 348 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 P0C879 139 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 CT45A8P0DMV1 189 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 CT45A9P0DMV2 189 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 MBL2P11226 248 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 LAMP1P11279 417 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 UCP1P25874 307 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 SLC7A2P52569 658 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 ERVPABLB-1P60509 514 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 KIAA0040Q15053 153 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 TGIF1Q15583 401 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 TRADDQ15628 312 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 MICAQ29983 383 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 CT45A2Q5DJT8 189 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 STEAP1BQ6NZ63 245 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 MOB2Q70IA6 237 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 CLYBLQ8N0X4 340 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 OR4L1Q8NH43 312 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 UBTD2Q8WUN7 234 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 HAS2Q92819 552 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 BIRC7Q96CA5 298 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 EPSTI1Q96J88 318 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 ZNF350Q9GZX5 532 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 NAPBQ9H115 298 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 ASB8Q9H765 288 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 RNPEPL1Q9HAU8 725 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 IMPAD1Q9NX62 359 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 SENP1Q9P0U3 644 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 TEKT2Q9UIF3 430 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 PLEKHA6Q9Y2H5 1048 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 ARID1AO14497 2285 aa2.24□□□□□ -2.05
SMCHD1-206ENST00000581631 KAT6BQ8WYB5 2073 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 FGD5Q6ZNL6 1462 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 FRG2CA6NGY1 282 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 PSMD3O43242 534 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 TSPAN2O60636 221 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 DUSP14O95147 198 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 NUDT14O95848 222 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 IGHV3-9P01782 118 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 ZNF32P17041 273 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 ELK1P19419 428 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 PRKAR2BP31323 418 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 TRIM23P36406 574 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 PRKCEQ02156 737 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 ISXQ2M1V0 245 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 KBTBD12Q3ZCT8 623 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 PAN3Q58A45 887 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 DDI2Q5TDH0 399 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 SEL1L2Q5TEA6 688 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 ZNF544Q6NX49 715 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 C2orf66Q6UXQ4 117 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 PRSS48Q7RTY5 328 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 SYCP3Q8IZU3 236 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 OR6M1Q8NGM8 313 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 GOT1L1Q8NHS2 421 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 ZNF564Q8TBZ8 553 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 VSIG2Q96IQ7 327 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 COG3Q96JB2 828 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 CAPNS2Q96L46 248 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 CASD1Q96PB1 797 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 PRAM1Q96QH2 718 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 SLC26A1Q9H2B4 701 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 GRPEL1Q9HAV7 217 aa2.23□□□□□ -2.05
SMCHD1-206ENST00000581631 RAI14Q9P0K7 980 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms