RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 METTL21AQ8WXB1 218 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 SLC39A7Q92504 469 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 CIDECQ96AQ7 238 aaPredicted RBP7.37□□□□□ -1.23
CCDC40-215ENST00000576033 CNRIP1Q96F85 164 aaPredicted RBP7.37□□□□□ -1.23
CCDC40-215ENST00000576033 FCRL1Q96LA6 429 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 RAB3IPQ96QF0 476 aaPredicted RBP7.37□□□□□ -1.23
CCDC40-215ENST00000576033 CENPKQ9BS16 269 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 SLC25A23Q9BV35 468 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 CNPPD1Q9BV87 410 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 TRIM4Q9C037 500 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 ROGDIQ9GZN7 287 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 RASSF4Q9H2L5 321 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 RIC8BQ9NVN3 520 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 PHF11Q9UIL8 331 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 MCM8Q9UJA3 840 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 ERVK-19Q9WJR5 959 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 DTX4Q9Y2E6 619 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 MMACHCQ9Y4U1 282 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 PCDHA9Q9Y5H5 950 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 COPG1Q9Y678 874 aaKnown RBP7.37□□□□□ -1.23
CCDC40-215ENST00000576033 EML6Q6ZMW3 1958 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 SERTM1A2A2V5 107 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 TMEM200CA6NKL6 621 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 SLC28A1O00337 649 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 IGHEP01854 428 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 C1QCP02747 245 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 SERPINA7P05543 415 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 ALDOCP09972 364 aaKnown RBP7.36□□□□□ -1.23
CCDC40-215ENST00000576033 COX4I1P13073 169 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 CD1EP15812 388 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 SOX11P35716 441 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 BUD31P41223 144 aaPredicted RBP7.36□□□□□ -1.23
CCDC40-215ENST00000576033 TSFMP43897 325 aaKnown RBP7.36□□□□□ -1.23
CCDC40-215ENST00000576033 STT3AP46977 705 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 GPR143P51810 404 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 MNAT1P51948 309 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 DIO3P55073 304 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 NME5P56597 212 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 HSD17B7P56937 341 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 IGLV3-21P80748 117 aaPredicted RBP7.36□□□□□ -1.23
CCDC40-215ENST00000576033 ZNF33BQ06732 778 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 ZNF763Q0D2J5 394 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 AIMP2Q13155 320 aaKnown RBP7.36□□□□□ -1.23
CCDC40-215ENST00000576033 SQLEQ14534 574 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 MYBPC3Q14896 1274 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 EXOSC7Q15024 291 aaKnown RBP7.36□□□□□ -1.23
CCDC40-215ENST00000576033 NNATQ16517 81 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 DNAL1Q4LDG9 190 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 FBXW10Q5XX13 1052 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 PLAG1Q6DJT9 500 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 OR52E8Q6IFG1 317 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 FAM71E1Q6IPT2 247 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 NIPAL1Q6NVV3 410 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 SLC48A1Q6P1K1 146 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 PGM2L1Q6PCE3 622 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 ASB18Q6ZVZ8 466 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 LSRQ86X29 649 aaPredicted RBP7.36□□□□□ -1.23
CCDC40-215ENST00000576033 TICAM1Q8IUC6 712 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 C9orf40Q8IXQ3 194 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 KBTBD2Q8IY47 623 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 BEST3Q8N1M1 668 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 ZNF843Q8N446 348 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 RBMXL3Q8N7X1 1067 aaKnown RBP7.36□□□□□ -1.23
CCDC40-215ENST00000576033 Q8NA96 180 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 FAM13CQ8NE31 585 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 OR9A2Q8NGT5 310 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 RP9Q8TA86 221 aaKnown RBP7.36□□□□□ -1.23
CCDC40-215ENST00000576033 SUN3Q8TAQ9 357 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.36□□□□□ -1.23
CCDC40-215ENST00000576033 ELP5Q8TE02 316 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 CMTM5Q96DZ9 223 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 FER1L6-AS2Q96M78 137 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 ZNF681Q96N22 645 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 DGAT2Q96PD7 388 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 LMF1Q96S06 567 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 CCT7Q99832 543 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 OR8D2Q9GZM6 311 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 LHPPQ9H008 270 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 AKTIPQ9H8T0 292 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 ADAP2Q9NPF8 381 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 ATP13A2Q9NQ11 1180 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 C1orf109Q9NX04 203 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 C19orf25Q9UFG5 118 aaPredicted RBP7.36□□□□□ -1.23
CCDC40-215ENST00000576033 ADAM29Q9UKF5 820 aa7.36□□□□□ -1.23
CCDC40-215ENST00000576033 COL6A6A6NMZ7 2263 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 NCKAP5O14513 1909 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 B2RBV5 119 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 NPIPB8E9PQR5 432 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 H0YHG0 523 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 MKRN2OSH3BPM6 223 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 CLDN4O14493 209 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 GYG2O15488 501 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 RGS14O43566 566 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 OR10H2O60403 315 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 VPS4BO75351 444 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 WISP2O76076 250 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 GPR75O95800 540 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 CHEK2O96017 543 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 CD63P08962 238 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 BCKDHAP12694 445 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms