RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 NRG3P56975 720 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 SIRPAP78324 504 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 BASP1P80723 227 aaKnown RBP5.34□□□□□ -1.55
SMG6-219ENST00000575663 SRSF2Q01130 221 aaKnown RBP5.34□□□□□ -1.55
SMG6-219ENST00000575663 BIKQ13323 160 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 THOC5Q13769 683 aaKnown RBP5.34□□□□□ -1.55
SMG6-219ENST00000575663 SQLEQ14534 574 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 NRF1Q16656 503 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 VWA1Q6PCB0 445 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 ZNF474Q6S9Z5 364 aaPredicted RBP5.34□□□□□ -1.55
SMG6-219ENST00000575663 CLEC2AQ6UVW9 174 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 DNAJC14Q6Y2X3 702 aaPredicted RBP5.34□□□□□ -1.55
SMG6-219ENST00000575663 RNF111Q6ZNA4 994 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 CENPUQ71F23 418 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 CHMP1BQ7LBR1 199 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 KIAA1328Q86T90 577 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 YRDCQ86U90 279 aaKnown RBP5.34□□□□□ -1.55
SMG6-219ENST00000575663 IFNEQ86WN2 208 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 OR2L5Q8NG80 312 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 OR56A3Q8NH54 315 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 SLC35B2Q8TB61 432 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 SPPL2AQ8TCT8 520 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 ANKRD7Q92527 254 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 STARD4Q96DR4 205 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 MS4A6EQ96DS6 147 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 PLPPR2Q96GM1 343 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 RBM18Q96H35 190 aaKnown RBP5.34□□□□□ -1.55
SMG6-219ENST00000575663 SENP5Q96HI0 755 aaPredicted RBP5.34□□□□□ -1.55
SMG6-219ENST00000575663 FBXL20Q96IG2 436 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 ZNF845Q96IR2 970 aaPredicted RBP5.34□□□□□ -1.55
SMG6-219ENST00000575663 OR4K3Q96R72 315 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 TNFRSF13CQ96RJ3 184 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 TACO1Q9BSH4 297 aaKnown RBP5.34□□□□□ -1.55
SMG6-219ENST00000575663 KIFC1Q9BW19 673 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 KLHL4Q9C0H6 718 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 ROGDIQ9GZN7 287 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 OPN3Q9H1Y3 402 aaPredicted RBP5.34□□□□□ -1.55
SMG6-219ENST00000575663 C12orf65Q9H3J6 166 aaKnown RBP5.34□□□□□ -1.55
SMG6-219ENST00000575663 METTL7AQ9H8H3 244 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 PRM3Q9NNZ6 103 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 SNX15Q9NRS6 342 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 SYBUQ9NX95 663 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 PAK5Q9P286 719 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 RNF14Q9UBS8 474 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 FBXO9Q9UK97 447 aaPredicted RBP5.34□□□□□ -1.55
SMG6-219ENST00000575663 KCNS2Q9ULS6 477 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 RNF112Q9ULX5 631 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 SOX13Q9UN79 622 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 PROCRQ9UNN8 238 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 LIPT1Q9Y234 373 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 DLGAP4Q9Y2H0 992 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 JRKLQ9Y4A0 524 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 KCNE2Q9Y6J6 123 aa5.34□□□□□ -1.55
SMG6-219ENST00000575663 ARID1AO14497 2285 aa5.34□□□□□ -1.56
SMG6-219ENST00000575663 ARHGAP21Q5T5U3 1957 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 A0A0G2JK05 382 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 SLC22A20A6NK97 555 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 CDC7O00311 574 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 PLOD2O00469 737 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 GNB5O14775 395 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 CLOCKO15516 846 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 HCRTR2O43614 444 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 GPRIN2O60269 458 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 LMX1BO60663 402 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 PLAUP00749 431 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 IGHV4-39P01824 125 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 TUBBP07437 444 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 ENO2P09104 434 aaPredicted RBP5.33□□□□□ -1.56
SMG6-219ENST00000575663 RHOXF2BP0C7M4 288 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 TBXA2RP21731 343 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 MGAT1P26572 445 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 HNRNPH1P31943 449 aaKnown RBP5.33□□□□□ -1.56
SMG6-219ENST00000575663 CASP3P42574 277 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 KCNC1P48547 511 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 FBXW4P57775 412 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 DSCR9P59020 149 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 ID2Q02363 134 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 PCDH1Q08174 1060 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 LOXL1Q08397 574 aaPredicted RBP5.33□□□□□ -1.56
SMG6-219ENST00000575663 KLF1Q13351 362 aaPredicted RBP5.33□□□□□ -1.56
SMG6-219ENST00000575663 EBPQ15125 230 aaKnown RBP5.33□□□□□ -1.56
SMG6-219ENST00000575663 PDLIM3Q53GG5 364 aaPredicted RBP5.33□□□□□ -1.56
SMG6-219ENST00000575663 FNDC7Q5VTL7 733 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 ARMC3Q5W041 872 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 HLA-DQA1Q5Y7H0 255 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 ANKRD34AQ69YU3 496 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 BICRALQ6AI39 1079 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 TIGD3Q6B0B8 471 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 CYB5R2Q6BCY4 276 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 NEPROQ6NW34 567 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 AADACL2Q6P093 401 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 NXPE4Q6UWF7 544 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 CES3Q6UWW8 571 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 PLXDC2Q6UX71 529 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 DNM1P46Q6ZS02 220 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 THOC6Q86W42 341 aaKnown RBP5.33□□□□□ -1.56
SMG6-219ENST00000575663 WFDC8Q8IUA0 241 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 LMNTD2Q8IXW0 634 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 SYCE1Q8N0S2 351 aa5.33□□□□□ -1.56
SMG6-219ENST00000575663 KRT78Q8N1N4 520 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms