RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 KRTCAP3Q53RY4 240 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 TEX35Q5T0J7 233 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 TTC19Q6DKK2 380 aaPredicted RBP6.91□□□□□ -1.3
NUP88-205ENST00000572809 HSDL2Q6YN16 418 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 TIFABQ6ZNK6 161 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 MILR1Q7Z6M3 343 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 GPR180Q86V85 440 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 FJX1Q86VR8 437 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 ZNF227Q86WZ6 799 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 OR4N5Q8IXE1 308 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 ZCCHC7Q8N3Z6 543 aaKnown RBP6.91□□□□□ -1.3
NUP88-205ENST00000572809 TMEM156Q8N614 296 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 OR52B6Q8NGF0 335 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 TANKQ92844 425 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 RELTQ969Z4 430 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 ANKRD9Q96BM1 317 aaPredicted RBP6.91□□□□□ -1.3
NUP88-205ENST00000572809 MTBPQ96DY7 904 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 MRPL46Q9H2W6 279 aaKnown RBP6.91□□□□□ -1.3
NUP88-205ENST00000572809 LIN28AQ9H9Z2 209 aaKnown RBP6.91□□□□□ -1.3
NUP88-205ENST00000572809 XPR1Q9UBH6 696 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 PHF11Q9UIL8 331 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 ZNF223Q9UK11 482 aaPredicted RBP6.91□□□□□ -1.3
NUP88-205ENST00000572809 PCTPQ9UKL6 214 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 YARS2Q9Y2Z4 477 aaKnown RBP6.91□□□□□ -1.3
NUP88-205ENST00000572809 ATG4BQ9Y4P1 393 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 LRRK2Q5S007 2527 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 USP9XQ93008 2570 aaPredicted RBP6.91□□□□□ -1.3
NUP88-205ENST00000572809 TRGV8A0A0C4DH27 118 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 IQANK1A0A1B0GTG1 560 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 ANKRD34BA5PLL1 514 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 TMEM200CA6NKL6 621 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 C17orf105B2RV13 164 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 KLRC4-KLRK1H3BQV0 150 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 ASNA1O43681 348 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 FGF17O60258 216 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 PRKNO60260 465 aaPredicted RBP6.9□□□□□ -1.3
NUP88-205ENST00000572809 NME2P1O60361 137 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 SLC25A12O75746 678 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 OR2J2O76002 312 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 ETHE1O95571 254 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 CLDN1O95832 211 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 SBK3P0C264 359 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 COX7A2P14406 83 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 TAC1P20366 129 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 GCAP28676 217 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 BSGP35613 385 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 BUD31P41223 144 aaPredicted RBP6.9□□□□□ -1.3
NUP88-205ENST00000572809 STT3AP46977 705 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 SSR4P51571 173 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 HNRNPH2P55795 449 aaKnown RBP6.9□□□□□ -1.3
NUP88-205ENST00000572809 RNF4P78317 190 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 ID2Q02363 134 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 RBPJQ06330 500 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 ANKRD39Q53RE8 183 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 C1QL3Q5VWW1 255 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 FRG2Q64ET8 278 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 C18orf63Q68DL7 685 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 HIST2H2BCQ6DN03 193 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 MRM1Q6IN84 353 aaKnown RBP6.9□□□□□ -1.3
NUP88-205ENST00000572809 CYP20A1Q6UW02 462 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 SPATC1Q76KD6 591 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 MAMDC2Q7Z304 686 aaPredicted RBP6.9□□□□□ -1.3
NUP88-205ENST00000572809 CPSF7Q8N684 471 aaKnown RBP6.9□□□□□ -1.3
NUP88-205ENST00000572809 OR4F6Q8NGB9 312 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 OR5L2Q8NGL0 311 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 OR8K3Q8NH51 312 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 OR14A16Q8NHC5 309 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 SLC2A12Q8TD20 617 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 FBLIM1Q8WUP2 373 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 PPWD1Q96BP3 646 aaKnown RBP6.9□□□□□ -1.3
NUP88-205ENST00000572809 DGAT2Q96PD7 388 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 FRG2BQ96QU4 278 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 SERPINI1Q99574 410 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 SPATA9Q9BWV2 254 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 OR8D2Q9GZM6 311 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 DDX31Q9H8H2 851 aaKnown RBP6.9□□□□□ -1.3
NUP88-205ENST00000572809 ZBTB26Q9HCK0 441 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 SEMA4BQ9NPR2 832 aaPredicted RBP6.9□□□□□ -1.3
NUP88-205ENST00000572809 LYARQ9NX58 379 aaKnown RBP6.9□□□□□ -1.3
NUP88-205ENST00000572809 AHSPQ9NZD4 102 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 TMEM216Q9P0N5 145 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 MYOTQ9UBF9 498 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 ERVK-11Q9UQG0 969 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 KLF13Q9Y2Y9 288 aaPredicted RBP6.9□□□□□ -1.3
NUP88-205ENST00000572809 ASB4Q9Y574 426 aa6.9□□□□□ -1.3
NUP88-205ENST00000572809 PTPN13Q12923 2485 aa6.9□□□□□ -1.31
NUP88-205ENST00000572809 USP9YO00507 2555 aaPredicted RBP6.9□□□□□ -1.31
NUP88-205ENST00000572809 POLEQ07864 2286 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 A0A0A6YYD5 115 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 A0A1W2PR48 441 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 GLOD5A6NK44 160 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 WASHC1A8K0Z3 465 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 A8MT66 165 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 A8MVJ9 347 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 NPIPA5E9PKD4 350 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 WWP2O00308 870 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 CCL21O00585 134 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 PPP6CO00743 305 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 PEX1O43933 1283 aa6.89□□□□□ -1.31
NUP88-205ENST00000572809 EEDO75530 441 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms