RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 GPR180Q86V85 440 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 ST6GALNAC3Q8NDV1 305 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 DAZLQ92904 295 aaKnown RBP13.49□□□□□ -0.25
COMMD4-225ENST00000569245 NCLNQ969V3 563 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 VMP1Q96GC9 406 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 SIGLEC12Q96PQ1 595 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 SERPINI1Q99574 410 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 NMRK1Q9NWW6 199 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 MS4A12Q9NXJ0 267 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 LRFN1Q9P244 771 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 VPS29Q9UBQ0 182 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 PHF11Q9UIL8 331 aa13.49□□□□□ -0.25
COMMD4-225ENST00000569245 CLEC18AA5D8T8 446 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 E9PBE3 544 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 PEX11AO75192 247 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 SEMA7AO75326 666 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 CRYABP02511 175 aaKnown RBP13.48□□□□□ -0.25
COMMD4-225ENST00000569245 CYB561P49447 251 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 MLF1P58340 268 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 ERVK-8P63133 956 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 IRX1P78414 480 aaPredicted RBP13.48□□□□□ -0.25
COMMD4-225ENST00000569245 EMX2Q04743 252 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 KIAA0040Q15053 153 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 SPDYAQ5MJ70 313 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 CLEC18BQ6UXF7 455 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 MTDHQ86UE4 582 aaKnown RBP13.48□□□□□ -0.25
COMMD4-225ENST00000569245 OR4N5Q8IXE1 308 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 CLEC18CQ8NCF0 446 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 APCDD1LQ8NCL9 501 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 OR14A16Q8NHC5 309 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 TAAR6Q96RI8 345 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 MYLK2Q9H1R3 596 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 RPF2Q9H7B2 306 aaKnown RBP13.48□□□□□ -0.25
COMMD4-225ENST00000569245 LRTM1Q9HBL6 345 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 MRGBPQ9NV56 204 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 C1orf109Q9NX04 203 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 SIRT5Q9NXA8 310 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 GIMAP2Q9UG22 337 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 SLC12A4Q9UP95 1085 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 TMED5Q9Y3A6 229 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 CLDN16Q9Y5I7 305 aa13.48□□□□□ -0.25
COMMD4-225ENST00000569245 C17orf105B2RV13 164 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 UBDO15205 165 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 EEDO75530 441 aaKnown RBP13.47□□□□□ -0.25
COMMD4-225ENST00000569245 ZFAND5O76080 213 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 SEMA3DO95025 777 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 ETHE1O95571 254 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 GBAP04062 536 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 FAM58BPP0C7Q3 252 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 COX7A2P14406 83 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 PCSK2P16519 638 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 BUD31P41223 144 aaPredicted RBP13.47□□□□□ -0.25
COMMD4-225ENST00000569245 ARFIP1P53367 373 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 PMP22Q01453 160 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 SRSF11Q05519 484 aaKnown RBP13.47□□□□□ -0.25
COMMD4-225ENST00000569245 MAD2L1Q13257 205 aaPredicted RBP13.47□□□□□ -0.25
COMMD4-225ENST00000569245 MAPKAPK3Q16644 382 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 C18orf63Q68DL7 685 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 NUDT13Q86X67 352 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 ZCCHC7Q8N3Z6 543 aaKnown RBP13.47□□□□□ -0.25
COMMD4-225ENST00000569245 TMEM156Q8N614 296 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 CPSF7Q8N684 471 aaKnown RBP13.47□□□□□ -0.25
COMMD4-225ENST00000569245 TMEM178AQ8NBL3 297 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 MDS2Q8NDY4 140 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 C7orf57Q8NEG2 295 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 DNAJB8Q8NHS0 232 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 TANKQ92844 425 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 TMEM125Q96AQ2 219 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 ANKRD9Q96BM1 317 aaPredicted RBP13.47□□□□□ -0.25
COMMD4-225ENST00000569245 C11orf24Q96F05 449 aaPredicted RBP13.47□□□□□ -0.25
COMMD4-225ENST00000569245 RBM18Q96H35 190 aaKnown RBP13.47□□□□□ -0.25
COMMD4-225ENST00000569245 FCRL1Q96LA6 429 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 DGAT2Q96PD7 388 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 LRRC37BQ96QE4 947 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 OR8D2Q9GZM6 311 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 ZNF385DQ9H6B1 395 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 WDR41Q9HAD4 459 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 SAR1AQ9NR31 198 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 LYARQ9NX58 379 aaKnown RBP13.47□□□□□ -0.25
COMMD4-225ENST00000569245 ASIC5Q9NY37 505 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 AHSPQ9NZD4 102 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 OSGIN2Q9Y236 505 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 ATG4BQ9Y4P1 393 aa13.47□□□□□ -0.25
COMMD4-225ENST00000569245 ARHGAP10A1A4S6 786 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 PROM1O43490 865 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 DYRK3O43781 588 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 SEC22BO75396 215 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 PRKRAO75569 313 aaKnown RBP13.46□□□□□ -0.25
COMMD4-225ENST00000569245 SLC25A12O75746 678 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 SP1P08047 785 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 ALDOCP09972 364 aaKnown RBP13.46□□□□□ -0.25
COMMD4-225ENST00000569245 ADSLP30566 484 aaPredicted RBP13.46□□□□□ -0.25
COMMD4-225ENST00000569245 BSGP35613 385 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 MRPL19P49406 292 aaKnown RBP13.46□□□□□ -0.25
COMMD4-225ENST00000569245 ATP4BP51164 291 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 HNRNPH2P55795 449 aaKnown RBP13.46□□□□□ -0.25
COMMD4-225ENST00000569245 TNFRSF17Q02223 184 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 TBL3Q12788 808 aaKnown RBP13.46□□□□□ -0.25
COMMD4-225ENST00000569245 GSTA3Q16772 222 aa13.46□□□□□ -0.25
COMMD4-225ENST00000569245 GALNTL6Q49A17 601 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms