RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 GOLGA8RI6L899 631 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 PGRMC2O15173 223 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 HNRNPRO43390 633 aaKnown RBP13.34□□□□□ -0.27
CMTM3-215ENST00000568477 DLX3O60479 287 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 SUPT7LO94864 414 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 OR4F21O95013 312 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 PDYNP01213 254 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 P04436 131 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 TPOP07202 933 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 AGAP20933 346 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 ATP5F1P24539 256 aaPredicted RBP13.34□□□□□ -0.27
CMTM3-215ENST00000568477 SLC37A1P57057 533 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 RASA2Q15283 850 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 UNC50Q53HI1 259 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 ZNF678Q5SXM1 525 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 NDUFAF5Q5TEU4 345 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 C6orf163Q5TEZ5 329 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 SP5Q6BEB4 398 aaPredicted RBP13.34□□□□□ -0.27
CMTM3-215ENST00000568477 ARHGAP11AQ6P4F7 1023 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 PAOXQ6QHF9 649 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 FAM47EQ6ZV65 393 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 GPRIN3Q6ZVF9 776 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 SLC22A16Q86VW1 577 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 SLC22A9Q8IVM8 553 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 GALNT12Q8IXK2 581 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 OR4K14Q8NGD5 310 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 OR52N2Q8NGI0 321 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 FAM57AQ8TBR7 257 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 PHF10Q8WUB8 498 aaKnown RBP13.34□□□□□ -0.27
CMTM3-215ENST00000568477 UCN3Q969E3 161 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 ZBTB9Q96C00 473 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 TMEM237Q96Q45 408 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 PHF12Q96QT6 1004 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 ZNF382Q96SR6 550 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 VKORC1Q9BQB6 163 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 TTTY12Q9BZ98 90 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 WWTR1Q9GZV5 400 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 DEFB127Q9H1M4 99 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 CXorf21Q9HAI6 301 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 PLSCR2Q9NRY7 297 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 RYDENQ9NUL5 291 aaKnown RBP13.34□□□□□ -0.27
CMTM3-215ENST00000568477 PKDREJQ9NTG1 2253 aa13.34□□□□□ -0.27
CMTM3-215ENST00000568477 DNAJC13O75165 2243 aa13.33□□□□□ -0.27
CMTM3-215ENST00000568477 NCOA6Q14686 2063 aaPredicted RBP13.33□□□□□ -0.27
CMTM3-215ENST00000568477 A0A1W2PS29 197 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 MANBAO00462 879 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 PDE9AO76083 593 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 NADKO95544 446 aaPredicted RBP13.33□□□□□ -0.28
CMTM3-215ENST00000568477 KRT6AP02538 564 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 KRT6BP04259 564 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 GSTA1P08263 222 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 CCL3P10147 92 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 PYGBP11216 843 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 HTR1EP28566 365 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 KRT6CP48668 564 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 XKP51811 444 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 PRKAA2P54646 552 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 GALNT1Q10472 559 aaPredicted RBP13.33□□□□□ -0.28
CMTM3-215ENST00000568477 EBPQ15125 230 aaKnown RBP13.33□□□□□ -0.28
CMTM3-215ENST00000568477 ZNF791Q3KP31 576 aaPredicted RBP13.33□□□□□ -0.28
CMTM3-215ENST00000568477 C3P1Q6ZMU1 363 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 CD163Q86VB7 1156 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 DND1Q8IYX4 353 aaKnown RBP13.33□□□□□ -0.28
CMTM3-215ENST00000568477 ARFGAP2Q8N6H7 521 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 CDYL2Q8N8U2 506 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 MARVELD3Q96A59 401 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 TLCD1Q96CP7 247 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 SPACA9Q96E40 222 aaPredicted RBP13.33□□□□□ -0.28
CMTM3-215ENST00000568477 HBEGFQ99075 208 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 IL1RL2Q9HB29 575 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 TBK1Q9UHD2 729 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 ZNF225Q9UK10 706 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 STK38LQ9Y2H1 464 aa13.33□□□□□ -0.28
CMTM3-215ENST00000568477 CACNA1CQ13936 2221 aa13.32□□□□□ -0.28
CMTM3-215ENST00000568477 C1orf226A1L170 272 aa13.32□□□□□ -0.28
CMTM3-215ENST00000568477 ADAM10O14672 748 aa13.32□□□□□ -0.28
CMTM3-215ENST00000568477 RGS16O15492 202 aaPredicted RBP13.32□□□□□ -0.28
CMTM3-215ENST00000568477 GLSO94925 669 aaPredicted RBP13.32□□□□□ -0.28
CMTM3-215ENST00000568477 HSD3B1P14060 373 aa13.32□□□□□ -0.28
CMTM3-215ENST00000568477 CPMP14384 443 aa13.32□□□□□ -0.28
CMTM3-215ENST00000568477 IMPDH1P20839 514 aa13.32□□□□□ -0.28
CMTM3-215ENST00000568477 NT5EP21589 574 aa13.32□□□□□ -0.28
CMTM3-215ENST00000568477 HSD3B2P26439 372 aa13.32□□□□□ -0.28
CMTM3-215ENST00000568477 GRNP28799 593 aaKnown RBP13.32□□□□□ -0.28
CMTM3-215ENST00000568477 SERPINB3P29508 390 aa13.32□□□□□ -0.28
CMTM3-215ENST00000568477 HMOX2P30519 316 aa13.32□□□□□ -0.28
CMTM3-215ENST00000568477 SSTR4P31391 388 aa13.32□□□□□ -0.28
CMTM3-215ENST00000568477 DNASE1L1P49184 302 aa13.32□□□□□ -0.28
CMTM3-215ENST00000568477 TBL3Q12788 808 aaKnown RBP13.32□□□□□ -0.28
CMTM3-215ENST00000568477 ZNF630Q2M218 657 aaPredicted RBP13.32□□□□□ -0.28
CMTM3-215ENST00000568477 TNFAIP8L3Q5GJ75 292 aa13.32□□□□□ -0.28
CMTM3-215ENST00000568477 TCHHL1Q5QJ38 904 aaPredicted RBP13.32□□□□□ -0.28
CMTM3-215ENST00000568477 HLA-DQA1Q5Y7H0 255 aa13.32□□□□□ -0.28
CMTM3-215ENST00000568477 SLC22A10Q63ZE4 541 aa13.32□□□□□ -0.28
CMTM3-215ENST00000568477 LYPD8Q6UX82 237 aa13.32□□□□□ -0.28
CMTM3-215ENST00000568477 NCCRP1Q6ZVX7 275 aaPredicted RBP13.32□□□□□ -0.28
CMTM3-215ENST00000568477 TAGAPQ8N103 731 aa13.32□□□□□ -0.28
CMTM3-215ENST00000568477 RIBC1Q8N443 379 aaPredicted RBP13.32□□□□□ -0.28
CMTM3-215ENST00000568477 FAM109AQ8N4B1 249 aa13.32□□□□□ -0.28
CMTM3-215ENST00000568477 C1orf52Q8N6N3 182 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms