RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 NT5EP21589 574 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 ALAS2P22557 587 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 DCTP40126 519 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 CHN2P52757 468 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 KCNJ10P78508 379 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 MAT1AQ00266 395 aaKnown RBP6.65□□□□□ -1.35
SMG1-215ENST00000568239 LPAL2Q16609 132 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 IFI44LQ53G44 452 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 MANEAQ5SRI9 462 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 PRR23CQ6ZRP0 262 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 C17orf82Q86X59 251 aaPredicted RBP6.65□□□□□ -1.35
SMG1-215ENST00000568239 OFCC1Q8IZS5 231 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 MARVELD2Q8N4S9 558 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 DHRSXQ8N5I4 330 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 TMEM52Q8NDY8 209 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 OR52J3Q8NH60 311 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 TBC1D20Q96BZ9 403 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 PEX11GQ96HA9 241 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 FBXL20Q96IG2 436 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 ZNF681Q96N22 645 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 COL21A1Q96P44 957 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 YIPF2Q9BWQ6 316 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 REEP1Q9H902 201 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 ZSCAN32Q9NX65 697 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 TESMINQ9Y4I5 508 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 H0YJX3 145 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 PLOD2O00469 737 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 DLGAP1O14490 977 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 HRO43593 1189 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 NUDT21O43809 227 aaKnown RBP6.64□□□□□ -1.35
SMG1-215ENST00000568239 DUX1O43812 170 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 FGF17O60258 216 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 ZBTB11O95625 1053 aaPredicted RBP6.64□□□□□ -1.35
SMG1-215ENST00000568239 CPMP14384 443 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 GLB1P16278 677 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 RRM2P31350 389 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 ALDH3A2P51648 485 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 CLCN2P51788 898 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 EEF1A2Q05639 463 aaKnown RBP6.64□□□□□ -1.35
SMG1-215ENST00000568239 SLC13A2Q13183 592 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 BLMHQ13867 455 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 DAG1Q14118 895 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 ERV3-1Q14264 604 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 NDUFA9Q16795 377 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 DUSP7Q16829 419 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 SYT16Q17RD7 645 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 PLK5Q496M5 336 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 PATL1Q86TB9 770 aaKnown RBP6.64□□□□□ -1.35
SMG1-215ENST00000568239 CA13Q8N1Q1 262 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 DNAJC22Q8N4W6 341 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 SIMC1Q8NDZ2 872 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 OR56A1Q8NGH5 318 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 OR5K1Q8NHB7 308 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 PSMA8Q8TAA3 256 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 GAB3Q8WWW8 586 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 SLC9A6Q92581 669 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 EDAQ92838 391 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 MMABQ96EY8 250 aaPredicted RBP6.64□□□□□ -1.35
SMG1-215ENST00000568239 C10orf90Q96M02 699 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 TREX2Q9BQ50 279 aaPredicted RBP6.64□□□□□ -1.35
SMG1-215ENST00000568239 FAM117AQ9C073 453 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 UCK1Q9HA47 277 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 LYRM4Q9HD34 91 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 ADAP2Q9NPF8 381 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 VNN3Q9NY84 501 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 TMEM9Q9P0T7 183 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 SEC14L3Q9UDX4 400 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 NDOR1Q9UHB4 597 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 MAU2Q9Y6X3 613 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 ADAMTS9Q9P2N4 1935 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 IGHV1OR21-1A0A087WYE8 117 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 HYKKA2RU49 373 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 CHST10O43529 356 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 PRSS23O95084 383 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 ALPLP05186 524 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 TFPTP0C1Z6 253 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 PORP16435 677 aaPredicted RBP6.64□□□□□ -1.35
SMG1-215ENST00000568239 HOXB6P17509 224 aaKnown RBP6.64□□□□□ -1.35
SMG1-215ENST00000568239 MAGEA2P43356 314 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 KHKP50053 298 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 ANXA11P50995 505 aaKnown RBP6.64□□□□□ -1.35
SMG1-215ENST00000568239 BNC1Q01954 994 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 GANABQ14697 944 aaKnown RBP6.64□□□□□ -1.35
SMG1-215ENST00000568239 HLA-BQ31612 363 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 TRMT12Q53H54 448 aaKnown RBP6.64□□□□□ -1.35
SMG1-215ENST00000568239 CRB2Q5IJ48 1285 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 FAM111BQ6SJ93 734 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 UGT2A3Q6UWM9 527 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 TMEM64Q6YI46 380 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 MAMSTRQ6ZN01 415 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 GALNT5Q7Z7M9 940 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 WDR5BQ86VZ2 330 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 HIPK1Q86Z02 1210 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 PLXDC1Q8IUK5 500 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 ARMC8Q8IUR7 673 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 SAMD14Q8IZD0 417 aaPredicted RBP6.64□□□□□ -1.35
SMG1-215ENST00000568239 SVOPLQ8N434 492 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 OR7G2Q8NG99 324 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 OR2I1PQ8NGU4 316 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 VANGL1Q8TAA9 524 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms