RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 WBP11Q9Y2W2 641 aaKnown RBP12.55□□□□□ -0.4
CLK3-218ENST00000566926 GPR45Q9Y5Y3 372 aa12.55□□□□□ -0.4
CLK3-218ENST00000566926 PYCARD-AS1I3L0S3 204 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 SAP18O00422 153 aaKnown RBP12.54□□□□□ -0.4
CLK3-218ENST00000566926 RTCAO00442 366 aaKnown RBP12.54□□□□□ -0.4
CLK3-218ENST00000566926 PLPP1O14494 284 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 ALDOCP09972 364 aaKnown RBP12.54□□□□□ -0.4
CLK3-218ENST00000566926 PIK3R1P27986 724 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 PPP2R1BP30154 601 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 BUD31P41223 144 aaPredicted RBP12.54□□□□□ -0.4
CLK3-218ENST00000566926 GSTM5P46439 218 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 NEK2P51955 445 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 HMGCS1Q01581 520 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 SLAMF1Q13291 335 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 CYLC2Q14093 348 aaPredicted RBP12.54□□□□□ -0.4
CLK3-218ENST00000566926 KIAA0040Q15053 153 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 IGFBP7Q16270 282 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 ACER2Q5QJU3 275 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 GALNT18Q6P9A2 607 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 CYP20A1Q6UW02 462 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 SCIMPQ6UWF3 145 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 PAGE2Q7Z2X7 111 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 GPR180Q86V85 440 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 TMEM132CQ8N3T6 1108 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 OR1N1Q8NGS0 311 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 ELP5Q8TE02 316 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 DAZLQ92904 295 aaKnown RBP12.54□□□□□ -0.4
CLK3-218ENST00000566926 HBEGFQ99075 208 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 ZBTB18Q99592 522 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 MAPKAP1Q9BPZ7 522 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 C1orf21Q9H246 121 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 WDR41Q9HAD4 459 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 ADAP2Q9NPF8 381 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 PNO1Q9NRX1 252 aaKnown RBP12.54□□□□□ -0.4
CLK3-218ENST00000566926 LYARQ9NX58 379 aaKnown RBP12.54□□□□□ -0.4
CLK3-218ENST00000566926 FBXW2Q9UKT8 454 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 PCDHGA10Q9Y5H3 936 aa12.54□□□□□ -0.4
CLK3-218ENST00000566926 OR5H15A6NDH6 313 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 A8MUA0 341 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 SLC22A3O75751 556 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 CBX6O95503 412 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 WDPCPO95876 746 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 IFNA16P05015 189 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 COX4I1P13073 169 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 DDX5P17844 614 aaKnown RBP12.53□□□□□ -0.4
CLK3-218ENST00000566926 ASMTP46597 345 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 TNFSF10P50591 281 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 CLCN2P51788 898 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 CLNS1AP54105 237 aaKnown RBP12.53□□□□□ -0.4
CLK3-218ENST00000566926 DMTNQ08495 405 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 ELAVL1Q15717 326 aaKnown RBP12.53□□□□□ -0.4
CLK3-218ENST00000566926 INAQ16352 499 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 DPY19L1Q2PZI1 675 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 DNAL1Q4LDG9 190 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 RFTN2Q52LD8 501 aaPredicted RBP12.53□□□□□ -0.4
CLK3-218ENST00000566926 IL23RQ5VWK5 629 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 NUDT13Q86X67 352 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 TREML1Q86YW5 311 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 RNF175Q8N4F7 328 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 CISD2Q8N5K1 135 aaKnown RBP12.53□□□□□ -0.4
CLK3-218ENST00000566926 HORMAD2Q8N7B1 307 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 B3GNT7Q8NFL0 401 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 TANKQ92844 425 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 SNRNP40Q96DI7 357 aaKnown RBP12.53□□□□□ -0.4
CLK3-218ENST00000566926 MTFMTQ96DP5 389 aaKnown RBP12.53□□□□□ -0.4
CLK3-218ENST00000566926 VMP1Q96GC9 406 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 CSF3RQ99062 836 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 ALOXE3Q9BYJ1 711 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 DEFB126Q9BYW3 111 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 LRMDAQ9H2I8 198 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 DDX31Q9H8H2 851 aaKnown RBP12.53□□□□□ -0.4
CLK3-218ENST00000566926 ARL8BQ9NVJ2 186 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 PLA2G3Q9NZ20 509 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 ADAM29Q9UKF5 820 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 CSAG2Q9Y5P2 127 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 CLCA3PQ9Y6N3 262 aa12.53□□□□□ -0.4
CLK3-218ENST00000566926 ARHGAP10A1A4S6 786 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 FAM234BA2RU67 622 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 CFAP73A6NFT4 308 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 DYRK3O43781 588 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 SNRPB2P08579 225 aaKnown RBP12.52□□□□□ -0.41
CLK3-218ENST00000566926 T-ENOLP0DO92 83 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 COX7A2P14406 83 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 TNNI3P19429 210 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 PRPS1L1P21108 318 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 GPX3P22352 226 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 RPL3P39023 403 aaKnown RBP12.52□□□□□ -0.41
CLK3-218ENST00000566926 HNRNPFP52597 415 aaKnown RBP12.52□□□□□ -0.41
CLK3-218ENST00000566926 DIO3P55073 304 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 KCNK10P57789 538 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 C21orf58P58505 322 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 RCAN2Q14206 197 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 NOXRED1Q6NXP6 359 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 RPS19BP1Q86WX3 136 aaKnown RBP12.52□□□□□ -0.41
CLK3-218ENST00000566926 TMEM52Q8NDY8 209 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 CATSPER1Q8NEC5 780 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 NFAM1Q8NET5 270 aaPredicted RBP12.52□□□□□ -0.41
CLK3-218ENST00000566926 OR14A16Q8NHC5 309 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 CHTF18Q8WVB6 975 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 C11orf24Q96F05 449 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms