RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 TRIM3O75382 744 aaPredicted RBP13.77□□□□□ -0.21
RNF40-209ENST00000566703 PRKRAO75569 313 aaKnown RBP13.77□□□□□ -0.21
RNF40-209ENST00000566703 ZWINTO95229 277 aa13.77□□□□□ -0.21
RNF40-209ENST00000566703 EPPINO95925 133 aa13.77□□□□□ -0.21
RNF40-209ENST00000566703 CLPSP04118 112 aa13.77□□□□□ -0.21
RNF40-209ENST00000566703 PIK3R1P27986 724 aa13.77□□□□□ -0.21
RNF40-209ENST00000566703 TMED10P49755 219 aaKnown RBP13.77□□□□□ -0.21
RNF40-209ENST00000566703 RPP38P78345 283 aaKnown RBP13.77□□□□□ -0.21
RNF40-209ENST00000566703 IRF9Q00978 393 aa13.77□□□□□ -0.21
RNF40-209ENST00000566703 FUT7Q11130 342 aa13.77□□□□□ -0.21
RNF40-209ENST00000566703 HLA-DQA1Q5Y7H0 255 aa13.77□□□□□ -0.21
RNF40-209ENST00000566703 ULK2Q8IYT8 1036 aa13.77□□□□□ -0.21
RNF40-209ENST00000566703 LIX1Q8N485 282 aa13.77□□□□□ -0.21
RNF40-209ENST00000566703 C17orf47Q8NEP4 570 aa13.77□□□□□ -0.21
RNF40-209ENST00000566703 OR4K14Q8NGD5 310 aa13.77□□□□□ -0.21
RNF40-209ENST00000566703 LRRC46Q96FV0 321 aa13.77□□□□□ -0.21
RNF40-209ENST00000566703 ANGPTL4Q9BY76 406 aa13.77□□□□□ -0.21
RNF40-209ENST00000566703 AHSPQ9NZD4 102 aa13.77□□□□□ -0.21
RNF40-209ENST00000566703 NPFFR2Q9Y5X5 522 aa13.77□□□□□ -0.21
RNF40-209ENST00000566703 F8P00451 2351 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 LRRC14BA6NHZ5 514 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 GLOD5A6NK44 160 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 PGRMC2O15173 223 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 AIFM1O95831 613 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 RBP1P09455 135 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 NAGAP17050 411 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 CEACAM8P31997 349 aaPredicted RBP13.76□□□□□ -0.21
RNF40-209ENST00000566703 PHBP35232 272 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 TIMP3P35625 211 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 SERPINB8P50452 374 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 NEK2P51955 445 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 NRG3P56975 720 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 ETF1P62495 437 aaKnown RBP13.76□□□□□ -0.21
RNF40-209ENST00000566703 RPS6KA2Q15349 733 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 TECRLQ5HYJ1 363 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 TMEM200AQ86VY9 491 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 PM20D2Q8IYS1 436 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 ZNF615Q8N8J6 731 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 OR7G1Q8NGA0 311 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 SPPL2AQ8TCT8 520 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 TRPC4APQ8TEL6 797 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 DOK4Q8TEW6 326 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 DIO2Q92813 273 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 NINJ1Q92982 152 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 ATP6V1E2Q96A05 226 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 ADIPOR1Q96A54 375 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 ZNF597Q96LX8 424 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 JSRP1Q96MG2 331 aaPredicted RBP13.76□□□□□ -0.21
RNF40-209ENST00000566703 SLC6A15Q9H2J7 730 aa13.76□□□□□ -0.21
RNF40-209ENST00000566703 NOL11Q9H8H0 719 aaKnown RBP13.76□□□□□ -0.21
RNF40-209ENST00000566703 CPSF2Q9P2I0 782 aaKnown RBP13.76□□□□□ -0.21
RNF40-209ENST00000566703 INTS1Q8N201 2190 aaKnown RBP13.75□□□□□ -0.21
RNF40-209ENST00000566703 CSMD1Q96PZ7 3565 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 EML6Q6ZMW3 1958 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 FAM221AA4D161 298 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 STX16-NPEPL1H3BU86 382 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 OR7A17O14581 309 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 STX16O14662 325 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 GUCY1B2O75343 617 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 CTAG2O75638 210 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 SIX3O95343 332 aaPredicted RBP13.75□□□□□ -0.21
RNF40-209ENST00000566703 ALDOAP04075 364 aaKnown RBP13.75□□□□□ -0.21
RNF40-209ENST00000566703 HPNP05981 417 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 GDF1P27539 372 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 SSTR4P31391 388 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 DNAJA1P31689 397 aaKnown RBP13.75□□□□□ -0.21
RNF40-209ENST00000566703 KIR2DL3P43628 341 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 CDK9P50750 372 aaKnown RBP13.75□□□□□ -0.21
RNF40-209ENST00000566703 ART1P52961 327 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 DUSP8Q13202 625 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 FBXL19-AS1Q494R0 122 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 FRG2Q64ET8 278 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 SEM1Q6ZVN7 128 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 PAGE2Q7Z2X7 111 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 WDR53Q7Z5U6 358 aaPredicted RBP13.75□□□□□ -0.21
RNF40-209ENST00000566703 PACS2Q86VP3 889 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 RELL1Q8IUW5 271 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 GALNT12Q8IXK2 581 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 UCN3Q969E3 161 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 NTNG2Q96CW9 530 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 FRG2BQ96QU4 278 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 TIMP4Q99727 224 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 FUT8Q9BYC5 575 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 ZDHHC18Q9NUE0 388 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 DNAJB12Q9NXW2 375 aaKnown RBP13.75□□□□□ -0.21
RNF40-209ENST00000566703 ZNF629Q9UEG4 869 aaPredicted RBP13.75□□□□□ -0.21
RNF40-209ENST00000566703 FETUBQ9UGM5 382 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 FOXD3Q9UJU5 478 aaPredicted RBP13.75□□□□□ -0.21
RNF40-209ENST00000566703 EDARQ9UNE0 448 aa13.75□□□□□ -0.21
RNF40-209ENST00000566703 DVL2O14641 736 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 GBAP04062 536 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 COL6A2P12110 1019 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 PORP16435 677 aaPredicted RBP13.74□□□□□ -0.21
RNF40-209ENST00000566703 CASP3P42574 277 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 TRPC1P48995 793 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 XKP51811 444 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 CCNG1P51959 295 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 CRYZQ08257 329 aaKnown RBP13.74□□□□□ -0.21
RNF40-209ENST00000566703 MAP4K2Q12851 820 aa13.74□□□□□ -0.21
RNF40-209ENST00000566703 NHSL2Q5HYW2 709 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms