RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 ADAM30Q9UKF2 790 aa20.47■□□□□ 0.87
SPSB3-208ENST00000566339 SF3B6Q9Y3B4 125 aaKnown RBP20.47■□□□□ 0.87
SPSB3-208ENST00000566339 TRDV1A0A1B0GX56 115 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 NOTOA8MTQ0 251 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 BCHEP06276 602 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 ACP2P11117 423 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 MAP2K3P46734 347 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 PREPP48147 710 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 VASPP50552 380 aaPredicted RBP20.46■□□□□ 0.87
SPSB3-208ENST00000566339 SMSP52788 366 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 SYT14P1Q58G82 188 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 HORMAD2Q8N7B1 307 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 OR2A12Q8NGT7 310 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 CHFRQ96EP1 664 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 ZNF582Q96NG8 517 aaPredicted RBP20.46■□□□□ 0.87
SPSB3-208ENST00000566339 OR51B5Q9H339 312 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 RPRD1BQ9NQG5 326 aaKnown RBP20.46■□□□□ 0.87
SPSB3-208ENST00000566339 COLQQ9Y215 455 aaPredicted RBP20.46■□□□□ 0.87
SPSB3-208ENST00000566339 KIF26AQ9ULI4 1882 aaPredicted RBP20.46■□□□□ 0.87
SPSB3-208ENST00000566339 C17orf113A0A1B0GUU1 675 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 PDPK1O15530 556 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 PRODHO43272 600 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 SH3BGRLO75368 114 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 C1QBP02746 253 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 PRKAR1AP10644 381 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 CASP9P55211 416 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 TAB1Q15750 504 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 LEXMQ3ZCV2 418 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 CYP27C1Q4G0S4 372 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 PYDC2Q56P42 97 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 C1orf94Q6P1W5 598 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 TMEM220Q6QAJ8 160 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 CHRDL2Q6WN34 429 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 ZNF767PQ75MW2 155 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 CHST14Q8NCH0 376 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 JPH3Q8WXH2 748 aaPredicted RBP20.46■□□□□ 0.87
SPSB3-208ENST00000566339 PITHD1Q9GZP4 211 aaPredicted RBP20.46■□□□□ 0.87
SPSB3-208ENST00000566339 MMP28Q9H239 520 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 RHBGQ9H310 441 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 ACSS1Q9NUB1 689 aaPredicted RBP20.46■□□□□ 0.87
SPSB3-208ENST00000566339 PCDH10Q9P2E7 1040 aa20.46■□□□□ 0.87
SPSB3-208ENST00000566339 NUFIP1Q9UHK0 495 aaKnown RBP20.46■□□□□ 0.87
SPSB3-208ENST00000566339 PLD2O14939 933 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 PLA2G10O15496 165 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 BNIP3LO60238 219 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 NME6O75414 186 aaPredicted RBP20.45■□□□□ 0.86
SPSB3-208ENST00000566339 TIMP2P16035 220 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 AZGP1P25311 298 aaKnown RBP20.45■□□□□ 0.86
SPSB3-208ENST00000566339 GABRR2P28476 465 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 IL12RB1P42701 662 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 KIR2DL3P43628 341 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 GIPRP48546 466 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 GZMKP49863 264 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 TAP2Q03519 686 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 ACSM1Q08AH1 577 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 DMPKQ09013 629 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 TARDBPQ13148 414 aaKnown RBP eCLIP20.45■□□□□ 0.86
SPSB3-208ENST00000566339 GPR19Q15760 415 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 MZT2AQ6P582 158 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 SLC36A4Q6YBV0 504 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 PRICKLE2Q7Z3G6 844 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 C19orf18Q8NEA5 215 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 LINC00615Q96LM1 132 aaPredicted RBP20.45■□□□□ 0.86
SPSB3-208ENST00000566339 DMRTB1Q96MA1 342 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 GTPBP2Q9BX10 602 aaKnown RBP20.45■□□□□ 0.86
SPSB3-208ENST00000566339 RANGRFQ9HD47 186 aaPredicted RBP20.45■□□□□ 0.86
SPSB3-208ENST00000566339 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.45■□□□□ 0.86
SPSB3-208ENST00000566339 TRIOBPQ9H2D6 2365 aa20.45■□□□□ 0.86
SPSB3-208ENST00000566339 HELZP42694 1942 aaKnown RBP20.44■□□□□ 0.86
SPSB3-208ENST00000566339 SGK494L7N484 410 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 LEFTY2O00292 366 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 SLC43A1O75387 559 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 SYN1P17600 705 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 GPC1P35052 558 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 ETV3P41162 512 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 ANXA11P50995 505 aaKnown RBP20.44■□□□□ 0.86
SPSB3-208ENST00000566339 GAS1P54826 345 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 FAPQ12884 760 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 PRSS53Q2L4Q9 553 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 MINDY4Q4G0A6 757 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 TRIQKQ629K1 86 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 TMIGD1Q6UXZ0 262 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 CMTM8Q8IZV2 173 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 GJD3Q8N144 294 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 SMPDL3AQ92484 453 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 ZNF514Q96K75 400 aaPredicted RBP20.44■□□□□ 0.86
SPSB3-208ENST00000566339 TTYH2Q9BSA4 534 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 KATNB1Q9BVA0 655 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 DPEP2Q9H4A9 486 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 PPP1R3EQ9H7J1 279 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 NT5DC2Q9H857 520 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 PELI2Q9HAT8 420 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 MRPL39Q9NYK5 338 aaKnown RBP20.44■□□□□ 0.86
SPSB3-208ENST00000566339 TVP23BQ9NYZ1 205 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 P2RX2Q9UBL9 471 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 A4GNTQ9UNA3 340 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 SLC9A8Q9Y2E8 581 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 SPIN1Q9Y657 262 aaPredicted RBP20.44■□□□□ 0.86
SPSB3-208ENST00000566339 PCM1Q15154 2024 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 LAMA2P24043 3122 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 1082.3 ms