RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 ZNF721Q8TF20 911 aa12.85□□□□□ -0.35
HERPUD1-210ENST00000565966 ART5Q96L15 291 aa12.85□□□□□ -0.35
HERPUD1-210ENST00000565966 FCRL1Q96LA6 429 aa12.85□□□□□ -0.35
HERPUD1-210ENST00000565966 C3orf30Q96M34 536 aa12.85□□□□□ -0.35
HERPUD1-210ENST00000565966 TRIM45Q9H8W5 580 aaPredicted RBP12.85□□□□□ -0.35
HERPUD1-210ENST00000565966 ZNF446Q9NWS9 450 aa12.85□□□□□ -0.35
HERPUD1-210ENST00000565966 YARS2Q9Y2Z4 477 aaKnown RBP12.85□□□□□ -0.35
HERPUD1-210ENST00000565966 NINQ8N4C6 2090 aa12.85□□□□□ -0.35
HERPUD1-210ENST00000565966 FLNCQ14315 2725 aa12.85□□□□□ -0.35
HERPUD1-210ENST00000565966 UQCRHLA0A096LP55 91 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 TMEM200CA6NKL6 621 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 ERAL1O75616 437 aaKnown RBP12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 NEURL1O76050 574 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 CBX6O95503 412 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 JUNP05412 331 aaKnown RBP12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 CPMP14384 443 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 DRD2P14416 443 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 UQCRFS1P47985 274 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 XKP51811 444 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 RPL38P63173 70 aaKnown RBP12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 RNF4P78317 190 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 HEPACAMQ14CZ8 416 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 SPRED3Q2MJR0 410 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 RFTN2Q52LD8 501 aaPredicted RBP12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 FAM71E1Q6IPT2 247 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 SLC25A25Q6KCM7 469 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 TMEM178AQ8NBL3 297 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 DNAJB8Q8NHS0 232 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 RAB3IL1Q8TBN0 382 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 DOK4Q8TEW6 326 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 RIT1Q92963 219 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 KLHL29Q96CT2 875 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 SCMH1Q96GD3 660 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 C5orf34Q96MH7 638 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 TAAR6Q96RI8 345 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 MYNNQ9NPC7 610 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 MYOTQ9UBF9 498 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 GIMAP2Q9UG22 337 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 PSME2Q9UL46 239 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 DOPEY2Q9Y3R5 2298 aa12.84□□□□□ -0.35
HERPUD1-210ENST00000565966 DIDO1Q9BTC0 2240 aaKnown RBP12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 ATP6AP2A0A1C7CYW4 349 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 HRKO00198 91 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 PEX11AO75192 247 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 SNNO75324 88 aaPredicted RBP12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 ATP6AP2O75787 350 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 CRYABP02511 175 aaKnown RBP12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 IGKV3-11P04433 115 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 SP1P08047 785 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 EDN3P14138 238 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 PORP16435 677 aaPredicted RBP12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 TACR1P25103 407 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 FEN1P39748 380 aaKnown RBP12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 RPL14P50914 215 aaKnown RBP12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 SSR4P51571 173 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 HK2P52789 917 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 ERVK-8P63133 956 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 DUSP2Q05923 314 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 C2orf80Q0P641 193 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 ELOAQ14241 798 aaKnown RBP12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 ZNF267Q14586 743 aaPredicted RBP12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 PDCD2Q16342 344 aaPredicted RBP12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 GALNTL6Q49A17 601 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 ATG16L1Q676U5 607 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 TRIM42Q8IWZ5 723 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 ST6GALNAC3Q8NDV1 305 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 CDC26Q8NHZ8 85 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 TMEM125Q96AQ2 219 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 CNRIP1Q96F85 164 aaPredicted RBP12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 FBXL20Q96IG2 436 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 EGLN2Q96KS0 407 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 PPP3R2Q96LZ3 170 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 ZNF681Q96N22 645 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 CCT7Q99832 543 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 CNPPD1Q9BV87 410 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 MANSC1Q9H8J5 431 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 LIN28AQ9H9Z2 209 aaKnown RBP12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 CXorf21Q9HAI6 301 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 KLHL1Q9NR64 748 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 OLAHQ9NV23 265 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 PNPOQ9NVS9 261 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 THAP1Q9NVV9 213 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 EHD3Q9NZN3 535 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 UTS2RQ9UKP6 389 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 EXO1Q9UQ84 846 aaKnown RBP12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 ERVK-19Q9WJR5 959 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 WBP11Q9Y2W2 641 aaKnown RBP12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 TMED5Q9Y3A6 229 aa12.83□□□□□ -0.36
HERPUD1-210ENST00000565966 MYO7BQ6PIF6 2116 aa12.82□□□□□ -0.36
HERPUD1-210ENST00000565966 ANKUB1A6NFN9 424 aa12.82□□□□□ -0.36
HERPUD1-210ENST00000565966 WWP2O00308 870 aa12.82□□□□□ -0.36
HERPUD1-210ENST00000565966 SLC25A12O75746 678 aa12.82□□□□□ -0.36
HERPUD1-210ENST00000565966 OR2J2O76002 312 aa12.82□□□□□ -0.36
HERPUD1-210ENST00000565966 CT62P0C5K7 136 aa12.82□□□□□ -0.36
HERPUD1-210ENST00000565966 SDC1P18827 310 aa12.82□□□□□ -0.36
HERPUD1-210ENST00000565966 CSNK2A2P19784 350 aaPredicted RBP12.82□□□□□ -0.36
HERPUD1-210ENST00000565966 DDCP20711 480 aa12.82□□□□□ -0.36
HERPUD1-210ENST00000565966 NT5EP21589 574 aa12.82□□□□□ -0.36
HERPUD1-210ENST00000565966 OCRLQ01968 901 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms