RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 KCNJ2P63252 427 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 TLE4Q04727 773 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 TFF3Q07654 80 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 FUT7Q11130 342 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 EBPQ15125 230 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 SF3B4Q15427 424 aaKnown RBP eCLIP11.22□□□□□ -0.619e-10■■■■■ 33.9
GTF3C1-204ENST00000564664 LGSNQ5TDP6 509 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 C6orf163Q5TEZ5 329 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 CES4AQ5XG92 561 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 HLA-DQA1Q5Y7H0 255 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 TMEM198Q66K66 360 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 TTC19Q6DKK2 380 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 ZNF585AQ6P3V2 769 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 ADGRD1Q6QNK2 874 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 EML6Q6ZMW3 1958 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 MILR1Q7Z6M3 343 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 DMRTC2Q8IXT2 367 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 INTS1Q8N201 2190 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 LRRC25Q8N386 305 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 PTGR2Q8N8N7 351 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 ZNF441Q8N8Z8 693 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 MNS1Q8NEH6 495 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 OR5M9Q8NGP3 310 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 MRPL57Q9BQC6 102 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 CXorf21Q9HAI6 301 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 PSME2Q9UL46 239 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 CFL2Q9Y281 166 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 CHCHD2Q9Y6H1 151 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 LRRC14BA6NHZ5 514 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 AHRRA9YTQ3 701 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 HRKO00198 91 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 PGRMC2O15173 223 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 URI1O94763 535 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 AIFM1O95831 613 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 OTCP00480 354 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 GLI4P10075 376 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 PORP16435 677 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 NAGAP17050 411 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 ARL1P40616 181 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 XKP51811 444 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 TRA2BP62995 288 aaKnown RBP11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 SLC25A35Q3KQZ1 300 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 CCNYL2Q5T2Q4 361 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 C1orf185Q5T7R7 199 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 LCA5Q86VQ0 697 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 PLD6Q8N2A8 252 aaKnown RBP11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 METTL4Q8N3J2 472 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 FAM13CQ8NE31 585 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 OR10Q1Q8NGQ4 319 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 NEIL3Q8TAT5 605 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 PHF21BQ96EK2 531 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 GAL3ST4Q96RP7 486 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 FMO2Q99518 471 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 C1QTNF3Q9BXJ4 246 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 UCK2Q9BZX2 261 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 MRPL46Q9H2W6 279 aaKnown RBP11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 ELOVL6Q9H5J4 265 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 EXO5Q9H790 373 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 ZNF703Q9H7S9 590 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 BRF2Q9HAW0 419 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 PROK2Q9HC23 129 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 SEMA4BQ9NPR2 832 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 PCTPQ9UKL6 214 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 CNOT11Q9UKZ1 510 aaKnown RBP11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 SNX6Q9UNH7 406 aa11.21□□□□□ -0.61
GTF3C1-204ENST00000564664 POLQO75417 2590 aa11.21□□□□□ -0.62
GTF3C1-204ENST00000564664 NINQ8N4C6 2090 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 A0A087WUV0 522 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 C1orf226A1L170 272 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 GOLGA6L10A6NI86 522 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 GLOD5A6NK44 160 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 WASHC1A8K0Z3 465 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 TRIM3O75382 744 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 PRKRAO75569 313 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 KLK1P06870 262 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 SNRPAP09012 282 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 CPMP14384 443 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 NR0B1P51843 470 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 RPS6KA2Q15349 733 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 RIPPLY2Q5TAB7 128 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 RTL6Q6ICC9 239 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 PACS2Q86VP3 889 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 CCDC71Q8IV32 467 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 GALNT12Q8IXK2 581 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 C17orf53Q8N3J3 647 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 LIX1Q8N485 282 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 ZNF615Q8N8J6 731 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 OR10G3Q8NGC4 313 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 OR52B6Q8NGF0 335 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 SREK1Q8WXA9 508 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 IFT81Q8WYA0 676 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 ADIPOR1Q96A54 375 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 CDK15Q96Q40 435 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 PAFAH2Q99487 392 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 DOHHQ9BU89 302 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 OR10A5Q9H207 317 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 CDC42EP4Q9H3Q1 356 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 ZBTB26Q9HCK0 441 aa11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 NPDC1Q9NQX5 325 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-204ENST00000564664 FAM215AQ9Y5M1 114 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms