RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 CES1P1Q9UKY3 287 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 ZNF780BQ9Y6R6 833 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 C2orf92A0A1B0GVN3 265 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 WIPF3A6NGB9 483 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 TFECO14948 347 aaPredicted RBP16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 P04436 131 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 RNF224P0DH78 156 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 GP1BBP13224 206 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 DRD2P14416 443 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 SSTR4P31391 388 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 FEN1P39748 380 aaKnown RBP16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 RFC3P40938 356 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 RAE1P78406 368 aaKnown RBP16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 PCLAFQ15004 111 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 HLA-DQA1Q5Y7H0 255 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 MMP21Q8N119 569 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 GHDCQ8N2G8 530 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 MREGQ8N565 214 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 GOLM1Q8NBJ4 401 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 MAGED4Q96JG8 741 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 FAM111AQ96PZ2 611 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 BRINP2Q9C0B6 783 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 WWTR1Q9GZV5 400 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 RRAGDQ9NQL2 400 aaPredicted RBP16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 RYDENQ9NUL5 291 aaKnown RBP16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 DLGAP4Q9Y2H0 992 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 HIVEP3Q5T1R4 2406 aa16.97■□□□□ 0.31
SYNGR3-204ENST00000564642 ZNF354AO60765 605 aaPredicted RBP16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 SPAG7O75391 227 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 CT62P0C5K7 136 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 UROSP10746 265 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 CNR1P21554 472 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 SERPINB3P29508 390 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 TIA1P31483 386 aaKnown RBP eCLIP16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 PLGLB1Q02325 96 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 FUT7Q11130 342 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 HEPACAMQ14CZ8 416 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 EBPQ15125 230 aaKnown RBP16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 RNFT1Q5M7Z0 435 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 SIAH3Q8IW03 269 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 ZFP62Q8NB50 900 aaPredicted RBP16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 OR7G1Q8NGA0 311 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 C16orf52Q8NHV5 167 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 RELTQ969Z4 430 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 TMEM109Q9BVC6 243 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 GATA5Q9BWX5 397 aaPredicted RBP16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 EBPLQ9BY08 206 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 OR10A5Q9H207 317 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 PFDN4Q9NQP4 134 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 SACM1LQ9NTJ5 587 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 UTS2RQ9UKP6 389 aa16.96■□□□□ 0.31
SYNGR3-204ENST00000564642 A1L4Q6 167 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 SLC19A2O60779 497 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 CLPSP04118 112 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 ATP1B1P05026 303 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 TUBBP07437 444 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 IL3P08700 152 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 ANXA4P09525 319 aaPredicted RBP16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 ALDH3A1P30838 453 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 GSTM5P46439 218 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 NR0B1P51843 470 aaKnown RBP16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 ZNF791Q3KP31 576 aaPredicted RBP16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 SLC22A10Q63ZE4 541 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 GALNT18Q6P9A2 607 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 BNC2Q6ZN30 1099 aaPredicted RBP16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 FAM47EQ6ZV65 393 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 TRIM46Q7Z4K8 759 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 SPPL2CQ8IUH8 684 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 DND1Q8IYX4 353 aaKnown RBP16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 TAGAPQ8N103 731 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 VWA5B2Q8N398 1253 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 OR2M7Q8NG81 312 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 TCP10LQ8TDR4 215 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 C16orf78Q8WTQ4 265 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 TP53INP1Q96A56 240 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 FAM173AQ9BQD7 235 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 TRMOQ9BU70 441 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 DEPPQ9NTK1 212 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 SIRT5Q9NXA8 310 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 SLC17A7Q9P2U7 560 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 HEY2Q9UBP5 337 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 PLEKHB1Q9UF11 243 aaPredicted RBP16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 SH3BGRL2Q9UJC5 107 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 RAB21Q9UL25 225 aa16.95■□□□□ 0.3
SYNGR3-204ENST00000564642 POLEQ07864 2286 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 G3V3Y1 287 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 ACOT7O00154 380 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 CCL21O00585 134 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 HS6ST1O60243 411 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 CDC40O60508 579 aaKnown RBP eCLIP16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 NADKO95544 446 aaPredicted RBP16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 CHEK2O96017 543 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 ABOP16442 354 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 CA7P43166 264 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 MAP4K2Q12851 820 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 PRICKLE4Q2TBC4 344 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 KRT71Q3SY84 523 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 CLEC6AQ6EIG7 209 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 FAM180BQ6P0A1 224 aa16.94■□□□□ 0.3
SYNGR3-204ENST00000564642 FAM111BQ6SJ93 734 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms