RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 NUDT8Q8WV74 236 aa9.18□□□□□ -0.94
UBFD1-203ENST00000564106 N4BP2L2Q92802 583 aaPredicted RBP9.18□□□□□ -0.94
UBFD1-203ENST00000564106 MOAP1Q96BY2 351 aa9.18□□□□□ -0.94
UBFD1-203ENST00000564106 MIEF2Q96C03 454 aa9.18□□□□□ -0.94
UBFD1-203ENST00000564106 SMIM10Q96HG1 83 aa9.18□□□□□ -0.94
UBFD1-203ENST00000564106 TRAPPC9Q96Q05 1148 aa9.18□□□□□ -0.94
UBFD1-203ENST00000564106 SORBS1Q9BX66 1292 aaKnown RBP9.18□□□□□ -0.94
UBFD1-203ENST00000564106 NPLQ9BXD5 320 aaPredicted RBP9.18□□□□□ -0.94
UBFD1-203ENST00000564106 UGT2B28Q9BY64 529 aa9.18□□□□□ -0.94
UBFD1-203ENST00000564106 KLHL31Q9H511 634 aa9.18□□□□□ -0.94
UBFD1-203ENST00000564106 CLK4Q9HAZ1 481 aaKnown RBP9.18□□□□□ -0.94
UBFD1-203ENST00000564106 LYRM4Q9HD34 91 aa9.18□□□□□ -0.94
UBFD1-203ENST00000564106 PDE7BQ9NP56 450 aa9.18□□□□□ -0.94
UBFD1-203ENST00000564106 TEX10Q9NXF1 929 aaPredicted RBP9.18□□□□□ -0.94
UBFD1-203ENST00000564106 THUMPD1Q9NXG2 353 aaKnown RBP9.18□□□□□ -0.94
UBFD1-203ENST00000564106 SLC39A1Q9NY26 324 aa9.18□□□□□ -0.94
UBFD1-203ENST00000564106 NKX1-2Q9UD57 310 aaPredicted RBP9.18□□□□□ -0.94
UBFD1-203ENST00000564106 ANAPC2Q9UJX6 822 aa9.18□□□□□ -0.94
UBFD1-203ENST00000564106 ASB4Q9Y574 426 aa9.18□□□□□ -0.94
UBFD1-203ENST00000564106 SPTBP11277 2137 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 B8ZZF3 427 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 H3BNX3 289 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 CXCR6O00574 342 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 CASQ2O14958 399 aaPredicted RBP9.17□□□□□ -0.94
UBFD1-203ENST00000564106 TOX3O15405 576 aaPredicted RBP9.17□□□□□ -0.94
UBFD1-203ENST00000564106 KLHL18O94889 574 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 BMP10O95393 424 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 C6orf47O95873 294 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 DLGAP3O95886 979 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 EIF2S1P05198 315 aaKnown RBP9.17□□□□□ -0.94
UBFD1-203ENST00000564106 PVRP15151 417 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 ST6GAL1P15907 406 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 IL1RNP18510 177 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 ATP6V1B2P21281 511 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 CERS1P27544 350 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 MPIP34949 423 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 SOAT1P35610 550 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 ARL4DP49703 201 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 EMP3P54852 163 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 OR4D2P58180 307 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 RAB8AP61006 207 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 BTN3A2P78410 334 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 MC2RQ01718 297 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 TNFRSF17Q02223 184 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 TRA2AQ13595 282 aaKnown RBP eCLIP9.17□□□□□ -0.94
UBFD1-203ENST00000564106 SELPLGQ14242 412 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 VMACQ2NL98 169 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 MUM1Q2TAK8 710 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 GTDC1Q4AE62 458 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 FAM98BQ52LJ0 330 aaKnown RBP9.17□□□□□ -0.94
UBFD1-203ENST00000564106 TMTC4Q5T4D3 741 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 INTS11Q5TA45 600 aaKnown RBP9.17□□□□□ -0.94
UBFD1-203ENST00000564106 CPZQ66K79 652 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 TMEM214Q6NUQ4 689 aaKnown RBP9.17□□□□□ -0.94
UBFD1-203ENST00000564106 WDR74Q6RFH5 385 aaPredicted RBP9.17□□□□□ -0.94
UBFD1-203ENST00000564106 ANGPTL8Q6UXH0 198 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 ZNF793Q6ZN11 406 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 FKBP9P1Q75LS8 142 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 SPPL2CQ8IUH8 684 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 KCT2Q8NC54 265 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 OR52N2Q8NGI0 321 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 PSMA8Q8TAA3 256 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 NCLNQ969V3 563 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 FAM162AQ96A26 154 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 RNF145Q96MT1 663 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 BBS4Q96RK4 519 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 DPYSL5Q9BPU6 564 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 DPH2Q9BQC3 489 aaPredicted RBP9.17□□□□□ -0.94
UBFD1-203ENST00000564106 SLC35A5Q9BS91 424 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 DDA1Q9BW61 102 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 AKIRIN1Q9H9L7 192 aaPredicted RBP9.17□□□□□ -0.94
UBFD1-203ENST00000564106 ANKHQ9HCJ1 492 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 SLC35C2Q9NQQ7 365 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 SEMA3GQ9NS98 782 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 SLC6A13Q9NSD5 602 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 STARD5Q9NSY2 213 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 CCM2LQ9NUG4 571 aaPredicted RBP9.17□□□□□ -0.94
UBFD1-203ENST00000564106 SOHLH2Q9NX45 425 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 RPS6KA6Q9UK32 745 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 UTS2RQ9UKP6 389 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 PLCL2Q9UPR0 1127 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 SAMD4AQ9UPU9 718 aaKnown RBP9.17□□□□□ -0.94
UBFD1-203ENST00000564106 ZNF451Q9Y4E5 1061 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 ZNF780BQ9Y6R6 833 aa9.17□□□□□ -0.94
UBFD1-203ENST00000564106 COL12A1Q99715 3063 aa9.16□□□□□ -0.94
UBFD1-203ENST00000564106 FER1L5A0AVI2 2057 aa9.16□□□□□ -0.94
UBFD1-203ENST00000564106 TNRC6AQ8NDV7 1962 aaKnown RBP9.16□□□□□ -0.94
UBFD1-203ENST00000564106 A0A0G2JN53 185 aa9.16□□□□□ -0.94
UBFD1-203ENST00000564106 RNF103-CHMP3A0A140T963 221 aa9.16□□□□□ -0.94
UBFD1-203ENST00000564106 TMEM247A6NEH6 219 aa9.16□□□□□ -0.94
UBFD1-203ENST00000564106 SLC9B1P1A6NJY1 282 aa9.16□□□□□ -0.94
UBFD1-203ENST00000564106 B4E171 279 aa9.16□□□□□ -0.94
UBFD1-203ENST00000564106 STMND1H3BQB6 276 aa9.16□□□□□ -0.94
UBFD1-203ENST00000564106 K7EM74 188 aa9.16□□□□□ -0.94
UBFD1-203ENST00000564106 TERTO14746 1132 aaKnown RBP9.16□□□□□ -0.94
UBFD1-203ENST00000564106 PROM1O43490 865 aa9.16□□□□□ -0.94
UBFD1-203ENST00000564106 PEX1O43933 1283 aa9.16□□□□□ -0.94
UBFD1-203ENST00000564106 SLITRK5O94991 958 aa9.16□□□□□ -0.94
UBFD1-203ENST00000564106 AIFM1O95831 613 aa9.16□□□□□ -0.94
UBFD1-203ENST00000564106 C9P02748 559 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms