RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 FAM205AQ6ZU69 1335 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 GPRASP1Q5JY77 1395 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 HTATSF1O43719 755 aaKnown RBP4.43□□□□□ -1.7
LINC00557-201ENST00000563184 SYNGR4O95473 234 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 RENP00797 406 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 ALPPP05187 535 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 ALPPL2P10696 532 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 MBL2P11226 248 aaPredicted RBP4.43□□□□□ -1.7
LINC00557-201ENST00000563184 NDST1P52848 882 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 CDKL1Q00532 357 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 EMC2Q15006 297 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 ZNF528Q3MIS6 628 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 CMPK2Q5EBM0 449 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 TCTEX1D4Q5JR98 221 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 HIST2H2AA3Q6FI13 130 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 RFWD3Q6PCD5 774 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 REG3GQ6UW15 175 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 LINC00518Q8N0U6 118 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 POM121L12Q8N7R1 296 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 SAMD12Q8N8I0 201 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 RDH11Q8TC12 318 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 ACCSQ96QU6 501 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 SPXQ9BT56 116 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 XPO4Q9C0E2 1151 aaKnown RBP4.43□□□□□ -1.7
LINC00557-201ENST00000563184 ABCG8Q9H221 673 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 KCNN3Q9UGI6 736 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 MGAT4AQ9UM21 535 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 ATG4BQ9Y4P1 393 aa4.43□□□□□ -1.7
LINC00557-201ENST00000563184 GALR3O60755 368 aaPredicted RBP4.42□□□□□ -1.7
LINC00557-201ENST00000563184 PGK2P07205 417 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 MELTFP08582 738 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 FOLR2P14207 255 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 ACP1P24666 158 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 ZNF131P52739 623 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 LEMD1Q68G75 181 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 RALGAPA1Q6GYQ0 2036 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 FBXL22Q6P050 247 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 SLC25A42Q86VD7 318 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 FLVCR1-AS1Q8TAF5 88 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 FBXO25Q8TCJ0 367 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 COQ7Q99807 217 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 ST6GALNAC5Q9BVH7 336 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 RAB11FIP5Q9BXF6 653 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 UBXN6Q9BZV1 441 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 SP140LQ9H930 580 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 ERVK-18Q9QC07 812 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 EIF3KQ9UBQ5 218 aaKnown RBP4.42□□□□□ -1.7
LINC00557-201ENST00000563184 ENTPD4Q9Y227 616 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 CSAG2Q9Y5P2 127 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 CPQQ9Y646 472 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 RAD54L2Q9Y4B4 1467 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 ZMYM6O95789 1325 aa4.42□□□□□ -1.7
LINC00557-201ENST00000563184 ARPC1BO15143 372 aaKnown RBP4.41□□□□□ -1.7
LINC00557-201ENST00000563184 OAS1P00973 400 aaKnown RBP4.41□□□□□ -1.7
LINC00557-201ENST00000563184 APRTP07741 180 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 HIST1H2AGP0C0S8 130 aaPredicted RBP4.41□□□□□ -1.7
LINC00557-201ENST00000563184 ACADSP16219 412 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 BCL3P20749 454 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 PTPN4P29074 926 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 SFNP31947 248 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 SPRP35270 261 aaPredicted RBP4.41□□□□□ -1.7
LINC00557-201ENST00000563184 PGFP49763 221 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 SSTP61278 116 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 ZFP36L1Q07352 338 aaKnown RBP4.41□□□□□ -1.7
LINC00557-201ENST00000563184 CYLC2Q14093 348 aaPredicted RBP4.41□□□□□ -1.7
LINC00557-201ENST00000563184 PDK1Q15118 436 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 PKN2Q16513 984 aaKnown RBP4.41□□□□□ -1.7
LINC00557-201ENST00000563184 CLPPQ16740 277 aaPredicted RBP4.41□□□□□ -1.7
LINC00557-201ENST00000563184 TMEM44Q2T9K0 475 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 HKDC1Q2TB90 917 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 ZNF506Q5JVG8 444 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 DDI2Q5TDH0 399 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 AGAP7PQ5VUJ5 663 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 WDR88Q6ZMY6 472 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 ASRGL1Q7L266 308 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 YRDCQ86U90 279 aaKnown RBP4.41□□□□□ -1.7
LINC00557-201ENST00000563184 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.41□□□□□ -1.7
LINC00557-201ENST00000563184 ZNF619Q8N2I2 560 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 FGFRL1Q8N441 504 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 OR8H1Q8NGG4 311 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 HIST1H2ACQ93077 130 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 CCDC47Q96A33 483 aaKnown RBP4.41□□□□□ -1.7
LINC00557-201ENST00000563184 TMEM45BQ96B21 275 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 TMEM186Q96B77 213 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 CBWD1Q9BRT8 395 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 TNMDQ9H2S6 317 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 DCTPP1Q9H773 170 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 IL1RL2Q9HB29 575 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 HPS4Q9NQG7 708 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 TAS2R16Q9NYV7 291 aa4.41□□□□□ -1.7
LINC00557-201ENST00000563184 COL5A2P05997 1499 aaPredicted RBP4.41□□□□□ -1.7
LINC00557-201ENST00000563184 A0A0A6YYD4 124 aa4.4□□□□□ -1.71
LINC00557-201ENST00000563184 A0A1B0GTH9 108 aa4.4□□□□□ -1.71
LINC00557-201ENST00000563184 CFAP73A6NFT4 308 aa4.4□□□□□ -1.71
LINC00557-201ENST00000563184 FOXI3A8MTJ6 420 aaPredicted RBP4.4□□□□□ -1.71
LINC00557-201ENST00000563184 RNF212BA8MTL3 300 aa4.4□□□□□ -1.71
LINC00557-201ENST00000563184 VENTXO95231 258 aa4.4□□□□□ -1.71
LINC00557-201ENST00000563184 PDGFBP01127 241 aaPredicted RBP4.4□□□□□ -1.71
LINC00557-201ENST00000563184 MT-ND1P03886 318 aa4.4□□□□□ -1.71
LINC00557-201ENST00000563184 ZCCHC18P0CG32 403 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms