RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 ZNF791Q3KP31 576 aaPredicted RBP15.55■□□□□ 0.08
CLK3-210ENST00000563112 TMEM211Q6ICI0 200 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 C3P1Q6ZMU1 363 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 CD163Q86VB7 1156 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 FAM109AQ8N4B1 249 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 FAM13CQ8NE31 585 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 METTL6Q8TCB7 284 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 ZNF382Q96SR6 550 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 FAIM2Q9BWQ8 316 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 TP63Q9H3D4 680 aaPredicted RBP15.55■□□□□ 0.08
CLK3-210ENST00000563112 COQ3Q9NZJ6 369 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 CNIH4Q9P003 139 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 PCDHA9Q9Y5H5 950 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 MYO9AB2RTY4 2548 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 NCOA6Q14686 2063 aaPredicted RBP15.55■□□□□ 0.08
CLK3-210ENST00000563112 EML6Q6ZMW3 1958 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 ABCA12Q86UK0 2595 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 DNAJC13O75165 2243 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 A0A0G2JMM0 328 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 A0A1W2PPB8 328 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 A0A1W2PRS3 328 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 KIR3DP1A8MWS1 328 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 GLSO94925 669 aaPredicted RBP15.54■□□□□ 0.08
CLK3-210ENST00000563112 NADKO95544 446 aaPredicted RBP15.54■□□□□ 0.08
CLK3-210ENST00000563112 FBXO45P0C2W1 286 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 SSTR4P31391 388 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 DNASE1L1P49184 302 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 TRA2BP62995 288 aaKnown RBP15.54■□□□□ 0.08
CLK3-210ENST00000563112 KCNJ2P63252 427 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 GALNT1Q10472 559 aaPredicted RBP15.54■□□□□ 0.08
CLK3-210ENST00000563112 CSTF3Q12996 717 aaKnown RBP15.54■□□□□ 0.08
CLK3-210ENST00000563112 SLC48A1Q6P1K1 146 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 GSPT2Q8IYD1 628 aaKnown RBP15.54■□□□□ 0.08
CLK3-210ENST00000563112 GBP7Q8N8V2 638 aaPredicted RBP15.54■□□□□ 0.08
CLK3-210ENST00000563112 PAQR8Q8TEZ7 354 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 TP53INP1Q96A56 240 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 CCDC126Q96EE4 140 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 TMEM237Q96Q45 408 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 DMRTA2Q96SC8 542 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 ZDHHC11Q9H8X9 412 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 TUBA8Q9NY65 449 aaPredicted RBP15.54■□□□□ 0.08
CLK3-210ENST00000563112 ZNF225Q9UK10 706 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 BOKQ9UMX3 212 aaPredicted RBP15.54■□□□□ 0.08
CLK3-210ENST00000563112 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.54■□□□□ 0.08
CLK3-210ENST00000563112 LRBAP50851 2863 aa15.54■□□□□ 0.08
CLK3-210ENST00000563112 ADAM10O14672 748 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 TP53I11O14683 189 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 GLRA3O75311 464 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 ERAL1O75616 437 aaKnown RBP15.53■□□□□ 0.08
CLK3-210ENST00000563112 ESRRBO95718 433 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 ENO1P06733 434 aaKnown RBP15.53■□□□□ 0.08
CLK3-210ENST00000563112 CSNK2A2P19784 350 aaPredicted RBP15.53■□□□□ 0.08
CLK3-210ENST00000563112 GRNP28799 593 aaKnown RBP15.53■□□□□ 0.08
CLK3-210ENST00000563112 PIGAP37287 484 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 NR0B1P51843 470 aaKnown RBP15.53■□□□□ 0.08
CLK3-210ENST00000563112 PKNOX1P55347 436 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 NRG3P56975 720 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 FUT7Q11130 342 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 LCP2Q13094 533 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 SLC10A1Q14973 349 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 HYAL4Q2M3T9 481 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 LYPD8Q6UX82 237 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 FBXW8Q8N3Y1 598 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 TMEM251Q8N6I4 163 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 C1orf52Q8N6N3 182 aaKnown RBP15.53■□□□□ 0.08
CLK3-210ENST00000563112 OR7G1Q8NGA0 311 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 UBLCP1Q8WVY7 318 aaPredicted RBP15.53■□□□□ 0.08
CLK3-210ENST00000563112 TM4SF18Q96CE8 201 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 L3HYPDHQ96EM0 354 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 HBEGFQ99075 208 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 OR10A5Q9H207 317 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 EPB41L4BQ9H329 900 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 LDAHQ9H6V9 325 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 PPCSQ9HAB8 311 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 CFL2Q9Y281 166 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 ZNF780BQ9Y6R6 833 aa15.53■□□□□ 0.08
CLK3-210ENST00000563112 ATP6AP2A0A1C7CYW4 349 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 A0A1W2PS29 197 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 OR14I1A6ND48 311 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 NPIPA2E9PIF3 369 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 NPIPA3F8WFD2 350 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 ATP6AP2O75787 350 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 IGHG3P01860 377 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 CLPSP04118 112 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 MYL2P10916 166 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 COX6B1P14854 86 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 KRT15P19012 456 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 MAGEA5P43359 124 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 CCT5P48643 541 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 ALDH9A1P49189 494 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 TMED10P49755 219 aaKnown RBP15.52■□□□□ 0.08
CLK3-210ENST00000563112 NAA20P61599 178 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 RPP38P78345 283 aaKnown RBP15.52■□□□□ 0.08
CLK3-210ENST00000563112 FOXO1Q12778 655 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 TCHHL1Q5QJ38 904 aaPredicted RBP15.52■□□□□ 0.08
CLK3-210ENST00000563112 TBCELQ5QJ74 424 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 NCCRP1Q6ZVX7 275 aaPredicted RBP15.52■□□□□ 0.08
CLK3-210ENST00000563112 CCNYL1Q8N7R7 359 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 CA5BP1Q8WTZ4 195 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 MZB1Q8WU39 189 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms