RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 SIAH3Q8IW03 269 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 OR7G3Q8NG95 312 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 KIAA1524Q8TCG1 905 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 GPR148Q8TDV2 347 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 SAP25Q8TEE9 199 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 LIME1Q9H400 295 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 PEAK1Q9H792 1746 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 ZWILCHQ9H900 591 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 CLEC5AQ9NY25 188 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 MIS18AQ9NYP9 233 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 CPQQ9Y646 472 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 COL18A1P39060 1754 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 AKAP12Q02952 1782 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 UMODL1Q5DID0 1318 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 SALL1Q9NSC2 1324 aa2.38□□□□□ -2.03
HDGFL3-202ENST00000562702 ROCK1Q13464 1354 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 ARHGEF28Q8N1W1 1705 aaKnown RBP2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 HFM1A2PYH4 1435 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 SPATA31E1Q6ZUB1 1445 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 OR5H15A6NDH6 313 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 STX6O43752 255 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 ATP9AO75110 1047 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 FRAT2O75474 233 aaPredicted RBP2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 CRCPO75575 148 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 GH1P01241 217 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 HCKP08631 526 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 GSTA2P09210 222 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 FAM200BP0CF97 657 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 SKILP12757 684 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 ZBTB25P24278 435 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 FHITP49789 147 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 SLC34A1Q06495 639 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 SCARB2Q14108 478 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 LIPJQ5W064 366 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 OLFML2AQ68BL7 652 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 REP15Q6BDI9 236 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 ARMCX5Q6P1M9 558 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 SIGLEC15Q6ZMC9 328 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 CYP4V2Q6ZWL3 525 aaPredicted RBP2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 KRT77Q7Z794 578 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 HOOK3Q86VS8 718 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 CACUL1Q86Y37 369 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 TUSC5Q8IXB3 177 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 AQP12AQ8IXF9 295 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 KLHDC8AQ8IYD2 350 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 OR8H3Q8N146 312 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 ZNF781Q8N8C0 355 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 NKAIN3Q8N8D7 197 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 ITLN1Q8WWA0 313 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 TEKT1Q969V4 418 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 SNRNP40Q96DI7 357 aaKnown RBP2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 CDKN2AIPNLQ96HQ2 116 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 HSD17B14Q9BPX1 270 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 APOL2Q9BQE5 337 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 RSPH9Q9H1X1 276 aaPredicted RBP2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 ZNF665Q9H7R5 613 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 TMEM206Q9H813 350 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 PLEK2Q9NYT0 353 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 SEPT10Q9P0V9 454 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 LEF1Q9UJU2 399 aaPredicted RBP2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 GTF3C4Q9UKN8 822 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 ZNF346Q9UL40 294 aaKnown RBP2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 NOL7Q9UMY1 257 aaKnown RBP2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 ITM2BQ9Y287 266 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 NTNG1Q9Y2I2 539 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 LMO7Q8WWI1 1683 aa2.37□□□□□ -2.03
HDGFL3-202ENST00000562702 LRPPRCP42704 1394 aaKnown RBP2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 ABCC11Q96J66 1382 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 NRKQ7Z2Y5 1582 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 TECPR2O15040 1411 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 TNS3Q68CZ2 1445 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 YTHDC2Q9H6S0 1430 aaKnown RBP2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 RRBP1Q9P2E9 1410 aaKnown RBP2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 BTAF1O14981 1849 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 A0A087X0K7 114 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 TEX48A0A1B0GUV7 120 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 MAGEB16A2A368 324 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 GTPBP10A4D1E9 387 aaKnown RBP2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 FOXI3A8MTJ6 420 aaPredicted RBP2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 ZNF724A8MTY0 619 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 SLC33A1O00400 549 aaPredicted RBP2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 CHUKO15111 745 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 SYT7O43581 403 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 CSDE1O75534 798 aaKnown RBP2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 GLCEO94923 617 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 SEMA4FO95754 770 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 SLC16A8O95907 504 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 CCR4P51679 360 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 GSTO1P78417 241 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 ITPK1Q13572 414 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 RUNX3Q13761 415 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 CYLC2Q14093 348 aaPredicted RBP2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 Q1RN00 199 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 ANKRD20A4Q4UJ75 823 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 ANKRD20A8PQ5CZ79 823 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 ZNF789Q5FWF6 425 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 NHLRC3Q5JS37 347 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 ANKRD20A2Q5SQ80 823 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 ATAD3CQ5T2N8 411 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 ANKRD20A1Q5TYW2 823 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms