RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 CELA3AP09093 270 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 FBXO45P0C2W1 286 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 CT62P0C5K7 136 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 FAM153BP0C7A2 387 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 COX6B1P14854 86 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 TNFRSF8P28908 595 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 SERPINB3P29508 390 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 SSTR4P31391 388 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 PTGER4P35408 488 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 XKP51811 444 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 CLCQ05315 142 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 GALNT1Q10472 559 aaPredicted RBP9.48□□□□□ -0.89
CLK3-205ENST00000561673 TBL3Q12788 808 aaKnown RBP9.48□□□□□ -0.89
CLK3-205ENST00000561673 SLC10A1Q14973 349 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 EBPQ15125 230 aaKnown RBP9.48□□□□□ -0.89
CLK3-205ENST00000561673 HYAL4Q2M3T9 481 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 FAM153CQ494X1 144 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 UNC50Q53HI1 259 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 TMEM211Q6ICI0 200 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 TRILQ7L0X0 811 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 PAGE2Q7Z2X7 111 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 COMMD6Q7Z4G1 85 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 MMP21Q8N119 569 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 FAM109AQ8N4B1 249 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 RPRMLQ8N4K4 120 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 ZNF615Q8N8J6 731 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 ZNF441Q8N8Z8 693 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 MYRIPQ8NFW9 859 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 OR10G3Q8NGC4 313 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 OR4K14Q8NGD5 310 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 OR5M9Q8NGP3 310 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 OR5M3Q8NGP4 307 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 TRPC4APQ8TEL6 797 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 CA5BP1Q8WTZ4 195 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 SELENOMQ8WWX9 145 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 SDCCAG3Q96C92 435 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 MTBPQ96DY7 904 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 SPACA9Q96E40 222 aaPredicted RBP9.48□□□□□ -0.89
CLK3-205ENST00000561673 GAL3ST4Q96RP7 486 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 TP63Q9H3D4 680 aaPredicted RBP9.48□□□□□ -0.89
CLK3-205ENST00000561673 PROK2Q9HC23 129 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 PNPLA3Q9NST1 481 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 TMEM216Q9P0N5 145 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 CES1P1Q9UKY3 287 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 SNX6Q9UNH7 406 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 LIPGQ9Y5X9 500 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 CHCHD2Q9Y6H1 151 aaPredicted RBP9.48□□□□□ -0.89
CLK3-205ENST00000561673 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.48□□□□□ -0.89
CLK3-205ENST00000561673 ABCA12Q86UK0 2595 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 C2orf92A0A1B0GVN3 265 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 OR14I1A6ND48 311 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 SUSD5O60279 629 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 DLX3O60479 287 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 SUPT7LO94864 414 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 OR4F21O95013 312 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 RHOXF2BP0C7M4 288 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 RFPL3SP0C7P2 107 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 CPMP14384 443 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 PORP16435 677 aaPredicted RBP9.47□□□□□ -0.89
CLK3-205ENST00000561673 TAC1P20366 129 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 S1PR1P21453 382 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 MAPK12P53778 367 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 PMPCAQ10713 525 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 FUT7Q11130 342 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 SLC29A2Q14542 456 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 NTRK2Q16620 822 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 TCHHL1Q5QJ38 904 aaPredicted RBP9.47□□□□□ -0.89
CLK3-205ENST00000561673 ZNF678Q5SXM1 525 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 PRAMEF20Q5VT98 475 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 TMEM64Q6YI46 380 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 GALNT12Q8IXK2 581 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 DND1Q8IYX4 353 aaKnown RBP9.47□□□□□ -0.89
CLK3-205ENST00000561673 ZNF295-AS1Q8N0V1 137 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 TAGAPQ8N103 731 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 FBXW8Q8N3Y1 598 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 CDYL2Q8N8U2 506 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 FAM13CQ8NE31 585 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 ADIPOR1Q96A54 375 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 TP53INP1Q96A56 240 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 TM4SF18Q96CE8 201 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 TMEM237Q96Q45 408 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 HBEGFQ99075 208 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 RHOXF2Q9BQY4 288 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 TXLNGYQ9BZA5 131 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 TRIM8Q9BZR9 551 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 OR10A5Q9H207 317 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 EPB41L4BQ9H329 900 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 BRF2Q9HAW0 419 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 ZFP64Q9NPA5 681 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 COQ3Q9NZJ6 369 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 CNIH4Q9P003 139 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 TNFRSF10DQ9UBN6 386 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 TRPS1Q9UHF7 1281 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 PCDHA9Q9Y5H5 950 aa9.47□□□□□ -0.89
CLK3-205ENST00000561673 NCOA6Q14686 2063 aaPredicted RBP9.47□□□□□ -0.89
CLK3-205ENST00000561673 CREBBPQ92793 2442 aa9.46□□□□□ -0.89
CLK3-205ENST00000561673 GTF3C1Q12789 2109 aa9.46□□□□□ -0.89
CLK3-205ENST00000561673 C1orf226A1L170 272 aa9.46□□□□□ -0.9
CLK3-205ENST00000561673 GOLGA8RI6L899 631 aa9.46□□□□□ -0.9
CLK3-205ENST00000561673 MANBAO00462 879 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms