RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 SASH3O75995 380 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 WISP1O95388 367 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 PORP16435 677 aaPredicted RBP12.88□□□□□ -0.35
TPM1-230ENST00000561266 NT5EP21589 574 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 GNLYP22749 145 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 GALNSP34059 522 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 TRHRP34981 398 aaPredicted RBP12.88□□□□□ -0.35
TPM1-230ENST00000561266 SOX3P41225 446 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 HLCSP50747 726 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 OC90Q02509 493 aaPredicted RBP12.88□□□□□ -0.35
TPM1-230ENST00000561266 ZNF763Q0D2J5 394 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 C2orf80Q0P641 193 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 BST1Q10588 318 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 FUT7Q11130 342 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 MRPL49Q13405 166 aaKnown RBP12.88□□□□□ -0.35
TPM1-230ENST00000561266 NR6A1Q15406 480 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 TRMT12Q53H54 448 aaKnown RBP12.88□□□□□ -0.35
TPM1-230ENST00000561266 ZNF766Q5HY98 468 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 ZNF324BQ6AW86 544 aaPredicted RBP12.88□□□□□ -0.35
TPM1-230ENST00000561266 RPUSD3Q6P087 351 aaKnown RBP12.88□□□□□ -0.35
TPM1-230ENST00000561266 DDIASQ8IXT1 998 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 CCDC116Q8IYX3 515 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 CDC26Q8NHZ8 85 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 SUN3Q8TAQ9 357 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 EXOSC8Q96B26 276 aaKnown RBP12.88□□□□□ -0.35
TPM1-230ENST00000561266 RASL10BQ96S79 203 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 PAIP2Q9BPZ3 127 aaKnown RBP12.88□□□□□ -0.35
TPM1-230ENST00000561266 EML4Q9HC35 981 aaKnown RBP12.88□□□□□ -0.35
TPM1-230ENST00000561266 PNPOQ9NVS9 261 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 LRFN1Q9P244 771 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 MAP10Q9P2G4 905 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 ZNF639Q9UID6 485 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 COPG1Q9Y678 874 aaKnown RBP12.88□□□□□ -0.35
TPM1-230ENST00000561266 HIVEP3Q5T1R4 2406 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 MYO18BQ8IUG5 2567 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 FLNCQ14315 2725 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 RGS14O43566 566 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 GUCY1B2O75343 617 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 HSPA4LO95757 839 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 CBX7O95931 251 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 ATP1B1P05026 303 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 SP1P08047 785 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 COX7A2P14406 83 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 DRD2P14416 443 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 PCSK2P16519 638 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 SDC1P18827 310 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 MST1P26927 711 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 SERPINB5P36952 375 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 SLC1A6P48664 564 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 RPL38P63173 70 aaKnown RBP12.87□□□□□ -0.35
TPM1-230ENST00000561266 MRPS35P82673 323 aaKnown RBP12.87□□□□□ -0.35
TPM1-230ENST00000561266 BIKQ13323 160 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 EXOSC7Q15024 291 aaKnown RBP12.87□□□□□ -0.35
TPM1-230ENST00000561266 MPEG1Q2M385 716 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 GALNTL6Q49A17 601 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 ZNF385BQ569K4 471 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 AGBL2Q5U5Z8 902 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 ANKRD26P1Q6NSI1 321 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 TMEM64Q6YI46 380 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 GALNTL5Q7Z4T8 443 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 ZNF441Q8N8Z8 693 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 OR8K3Q8NH51 312 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 CLHC1Q8NHS4 586 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 GFM2Q969S9 779 aaKnown RBP12.87□□□□□ -0.35
TPM1-230ENST00000561266 CTHRC1Q96CG8 243 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 PPP1R36Q96LQ0 422 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 SH3GL2Q99962 352 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 FAIM2Q9BWQ8 316 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 MYNNQ9NPC7 610 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 DEPPQ9NTK1 212 aa12.87□□□□□ -0.35
TPM1-230ENST00000561266 YARS2Q9Y2Z4 477 aaKnown RBP12.87□□□□□ -0.35
TPM1-230ENST00000561266 A0A0G2JMM0 328 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 A0A1W2PPB8 328 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 A0A1W2PRS3 328 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 PINLYPA6NC86 204 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 SYNDIG1LA6NDD5 238 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 KIR3DP1A8MWS1 328 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 TMEM114B3SHH9 223 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 PEX11AO75192 247 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 LRATO95237 230 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 CBX6O95503 412 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 BCKDHAP12694 445 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 CSNK2A2P19784 350 aaPredicted RBP12.86□□□□□ -0.35
TPM1-230ENST00000561266 DDCP20711 480 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 SSR4P51571 173 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 NR0B1P51843 470 aaKnown RBP12.86□□□□□ -0.35
TPM1-230ENST00000561266 MAP4K2Q12851 820 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 STX3Q13277 289 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 EBPQ15125 230 aaKnown RBP12.86□□□□□ -0.35
TPM1-230ENST00000561266 CEBPEQ15744 281 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 PIGGQ5H8A4 983 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 RNFT1Q5M7Z0 435 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 HHATQ5VTY9 493 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 SLC25A25Q6KCM7 469 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 IL20RBQ6UXL0 311 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 RNF111Q6ZNA4 994 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 TICAM1Q8IUC6 712 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 GALNT12Q8IXK2 581 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 OR9A2Q8NGT5 310 aa12.86□□□□□ -0.35
TPM1-230ENST00000561266 PPP1R14CQ8TAE6 165 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms