RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 NT5EP21589 574 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 ACVR2AP27037 513 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 SSTR2P30874 369 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 CHRNB4P30926 498 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 TRPC1P48995 793 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 XKP51811 444 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 EBPQ15125 230 aaKnown RBP9.41□□□□□ -0.9
LDLR-214ENST00000560628 HYAL4Q2M3T9 481 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 SPRED3Q2MJR0 410 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 TSNAXIP1Q2TAA8 658 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 HLA-DQA1Q5Y7H0 255 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 OR52E8Q6IFG1 317 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 ACAD11Q709F0 780 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 CTAGE4Q8IX94 777 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 MMP21Q8N119 569 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 TMEM151AQ8N4L1 468 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 CHTF18Q8WVB6 975 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 ISL2Q96A47 359 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 MRPL57Q9BQC6 102 aaKnown RBP9.41□□□□□ -0.9
LDLR-214ENST00000560628 MRPL46Q9H2W6 279 aaKnown RBP9.41□□□□□ -0.9
LDLR-214ENST00000560628 ELOVL6Q9H5J4 265 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 ZFP64Q9NPA5 681 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 KCNJ16Q9NPI9 418 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 NPDC1Q9NQX5 325 aaPredicted RBP9.41□□□□□ -0.9
LDLR-214ENST00000560628 AHSPQ9NZD4 102 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 CNIH4Q9P003 139 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 SPRR3Q9UBC9 169 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 CNOT11Q9UKZ1 510 aaKnown RBP9.41□□□□□ -0.9
LDLR-214ENST00000560628 SLC12A4Q9UP95 1085 aa9.41□□□□□ -0.9
LDLR-214ENST00000560628 CHCHD2Q9Y6H1 151 aaPredicted RBP9.41□□□□□ -0.9
LDLR-214ENST00000560628 CACNA1CQ13936 2221 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 OR14I1A6ND48 311 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 OR6C76A6NM76 312 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 A8MT66 165 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 AQP7O14520 342 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 SUSD5O60279 629 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 TOXO94900 526 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 PDYNP01213 254 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 GLI4P10075 376 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 CNTFP26441 200 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 GALNSP34059 522 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 FEN1P39748 380 aaKnown RBP9.4□□□□□ -0.9
LDLR-214ENST00000560628 MAPK12P53778 367 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 FBXW4P57775 412 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 TLE4Q04727 773 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 GLE1Q53GS7 698 aaKnown RBP9.4□□□□□ -0.9
LDLR-214ENST00000560628 WLSQ5T9L3 541 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 BICRALQ6AI39 1079 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 RTL6Q6ICC9 239 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 LETMD1Q6P1Q0 360 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 FAM111BQ6SJ93 734 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 PAGE2Q7Z2X7 111 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 COMMD6Q7Z4G1 85 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 GALNT12Q8IXK2 581 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 PRR22Q8IZ63 422 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 TAGAPQ8N103 731 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 METTL4Q8N3J2 472 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 FBXW8Q8N3Y1 598 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 ZNF615Q8N8J6 731 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 TRPC4APQ8TEL6 797 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 ZNF483Q8TF39 744 aaPredicted RBP9.4□□□□□ -0.9
LDLR-214ENST00000560628 SELENOMQ8WWX9 145 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 DIO2Q92813 273 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 HBEGFQ99075 208 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 TTYH2Q9BSA4 534 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 DOHHQ9BU89 302 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 OR10A5Q9H207 317 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 SLC6A15Q9H2J7 730 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 ZNF180Q9UJW8 692 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 ADAM29Q9UKF5 820 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 NFU1Q9UMS0 254 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 BOKQ9UMX3 212 aaPredicted RBP9.4□□□□□ -0.9
LDLR-214ENST00000560628 FAM215AQ9Y5M1 114 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 NPFFR2Q9Y5X5 522 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 ABCA12Q86UK0 2595 aa9.4□□□□□ -0.9
LDLR-214ENST00000560628 NINQ8N4C6 2090 aa9.4□□□□□ -0.91
LDLR-214ENST00000560628 A0A0G2JNJ9 132 aa9.39□□□□□ -0.91
LDLR-214ENST00000560628 EXOC1LA0A1B0GW35 172 aa9.39□□□□□ -0.91
LDLR-214ENST00000560628 LRRC3CA6NJW4 275 aa9.39□□□□□ -0.91
LDLR-214ENST00000560628 FIGNL2A6NMB9 653 aa9.39□□□□□ -0.91
LDLR-214ENST00000560628 HCN1O60741 890 aa9.39□□□□□ -0.91
LDLR-214ENST00000560628 ERAL1O75616 437 aaKnown RBP9.39□□□□□ -0.91
LDLR-214ENST00000560628 OR4F21O95013 312 aa9.39□□□□□ -0.91
LDLR-214ENST00000560628 OTCP00480 354 aa9.39□□□□□ -0.91
LDLR-214ENST00000560628 RPS17P08708 135 aaKnown RBP9.39□□□□□ -0.91
LDLR-214ENST00000560628 CPMP14384 443 aa9.39□□□□□ -0.91
LDLR-214ENST00000560628 CHN1P15882 459 aa9.39□□□□□ -0.91
LDLR-214ENST00000560628 PORP16435 677 aaPredicted RBP9.39□□□□□ -0.91
LDLR-214ENST00000560628 POU3F2P20265 443 aaPredicted RBP9.39□□□□□ -0.91
LDLR-214ENST00000560628 ENDOUP21128 410 aaKnown RBP9.39□□□□□ -0.91
LDLR-214ENST00000560628 GCAP28676 217 aa9.39□□□□□ -0.91
LDLR-214ENST00000560628 DEKP35659 375 aaKnown RBP9.39□□□□□ -0.91
LDLR-214ENST00000560628 HSD17B3P37058 310 aa9.39□□□□□ -0.91
LDLR-214ENST00000560628 ADH7P40394 386 aa9.39□□□□□ -0.91
LDLR-214ENST00000560628 CLCQ05315 142 aa9.39□□□□□ -0.91
LDLR-214ENST00000560628 TFF3Q07654 80 aa9.39□□□□□ -0.91
LDLR-214ENST00000560628 FUT7Q11130 342 aa9.39□□□□□ -0.91
LDLR-214ENST00000560628 NTRK2Q16620 822 aa9.39□□□□□ -0.91
LDLR-214ENST00000560628 UNC50Q53HI1 259 aa9.39□□□□□ -0.91
LDLR-214ENST00000560628 TCHHL1Q5QJ38 904 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms