RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 NPHS2Q9NP85 383 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 MRGBPQ9NV56 204 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 HPF1Q9NWY4 346 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 TSR3Q9UJK0 312 aaKnown RBP8.62□□□□□ -1.03
SMAD3-215ENST00000560424 PCTPQ9UKL6 214 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 FBXW2Q9UKT8 454 aa8.62□□□□□ -1.03
SMAD3-215ENST00000560424 ZNF407Q9C0G0 2248 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 SAGE2PA6NJ88 616 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 DNAJB6O75190 326 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 RDH16O75452 317 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 ITGA10O75578 1167 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 LYPLA1O75608 230 aaPredicted RBP8.61□□□□□ -1.03
SMAD3-215ENST00000560424 SUPT7LO94864 414 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 CATP04040 527 aaKnown RBP8.61□□□□□ -1.03
SMAD3-215ENST00000560424 S100BP04271 92 aaPredicted RBP8.61□□□□□ -1.03
SMAD3-215ENST00000560424 CHRNGP07510 517 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 HIST1H2AGP0C0S8 130 aaPredicted RBP8.61□□□□□ -1.03
SMAD3-215ENST00000560424 HIST1H2ADP20671 130 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 SSR4P51571 173 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 CLCN2P51788 898 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 ARFIP2P53365 341 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 PKNOX1P55347 436 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 SKP1P63208 163 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 IRX1P78414 480 aaPredicted RBP8.61□□□□□ -1.03
SMAD3-215ENST00000560424 ABATP80404 500 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 MEF2AQ02078 507 aaPredicted RBP8.61□□□□□ -1.03
SMAD3-215ENST00000560424 RHAGQ02094 409 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 RELAQ04206 551 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 CLCQ05315 142 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 PHKG1Q16816 387 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 SH2D4BQ5SQS7 431 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 EPGNQ6UW88 154 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 UBE2R2Q712K3 238 aaPredicted RBP8.61□□□□□ -1.03
SMAD3-215ENST00000560424 TRPM8Q7Z2W7 1104 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 MDGA2Q7Z553 956 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 PLD3Q8IV08 490 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 FAM109AQ8N4B1 249 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 ARHGEF39Q8N4T4 335 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 CCNYL1Q8N7R7 359 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 ZNF781Q8N8C0 355 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 CAMKVQ8NCB2 501 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 PSD4Q8NDX1 1056 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 OR9A1PQ8NGU1 263 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 ATL1Q8WXF7 558 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 CCT6BQ92526 530 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 PIGTQ969N2 578 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 MAELQ96JY0 434 aaKnown RBP8.61□□□□□ -1.03
SMAD3-215ENST00000560424 HIST1H2AHQ96KK5 128 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 ZNF382Q96SR6 550 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 HIST1H2AJQ99878 128 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 H2AFJQ9BTM1 129 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 TTTY12Q9BZ98 90 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 CD274Q9NZQ7 290 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 KCMF1Q9P0J7 381 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 ADAMTS6Q9UKP5 1117 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 PDE10AQ9Y233 779 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 ATRQ13535 2644 aa8.61□□□□□ -1.03
SMAD3-215ENST00000560424 IGKV1-8A0A0C4DH67 115 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 A0A0G2JND7 137 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 TRBV11-1A0A0K0K1C0 115 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 CCT8L1PA6NM43 557 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 TRPC5OSA6NMA1 111 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 AQP7O14520 342 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 SIX3O95343 332 aaPredicted RBP8.6□□□□□ -1.03
SMAD3-215ENST00000560424 ESRRBO95718 433 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 FHP07954 510 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 HSD17B2P37059 387 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 SLC6A12P48065 614 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 NR0B1P51843 470 aaKnown RBP8.6□□□□□ -1.03
SMAD3-215ENST00000560424 AQP5P55064 265 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 RPS15AP62244 130 aaKnown RBP8.6□□□□□ -1.03
SMAD3-215ENST00000560424 E2F2Q14209 437 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 ARHGAP19Q14CB8 494 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 RTL6Q6ICC9 239 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 ZNF425Q6IV72 752 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 PRSS57Q6UWY2 283 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 TRILQ7L0X0 811 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 LRRC70Q7Z2Q7 622 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 MAVSQ7Z434 540 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 SPNS2Q8IVW8 549 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 OR2M7Q8NG81 312 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 RFWD2Q8NHY2 731 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 LINC01560Q8TB33 94 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 ASB15Q8WXK1 588 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 TBC1D20Q96BZ9 403 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 FBXL8Q96CD0 374 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 CCDC138Q96M89 665 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 PTCHD1Q96NR3 888 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 LRRC37BQ96QE4 947 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 CCDC28BQ9BUN5 200 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 NTMT1Q9BV86 223 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 TMEM120AQ9BXJ8 343 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 CD244Q9BZW8 370 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 MYLK2Q9H1R3 596 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 ZDHHC11Q9H8X9 412 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 SYNPO2LQ9H987 977 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 ZDHHC2Q9UIJ5 367 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 EIF3LQ9Y262 564 aaKnown RBP8.6□□□□□ -1.03
SMAD3-215ENST00000560424 NAALAD2Q9Y3Q0 740 aa8.6□□□□□ -1.03
SMAD3-215ENST00000560424 LIPGQ9Y5X9 500 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms