RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 PAGE2Q7Z2X7 111 aa13.59□□□□□ -0.23
IDH3A-219ENST00000560414 FGD2Q7Z6J4 655 aa13.59□□□□□ -0.23
IDH3A-219ENST00000560414 SLC22A9Q8IVM8 553 aa13.59□□□□□ -0.23
IDH3A-219ENST00000560414 GPALPP1Q8IXQ4 340 aa13.59□□□□□ -0.23
IDH3A-219ENST00000560414 GHDCQ8N2G8 530 aa13.59□□□□□ -0.23
IDH3A-219ENST00000560414 C1orf52Q8N6N3 182 aaKnown RBP13.59□□□□□ -0.23
IDH3A-219ENST00000560414 ZFP62Q8NB50 900 aaPredicted RBP13.59□□□□□ -0.23
IDH3A-219ENST00000560414 POGLUT1Q8NBL1 392 aa13.59□□□□□ -0.23
IDH3A-219ENST00000560414 C16orf52Q8NHV5 167 aa13.59□□□□□ -0.23
IDH3A-219ENST00000560414 NUBPLQ8TB37 319 aa13.59□□□□□ -0.23
IDH3A-219ENST00000560414 EPS8L3Q8TE67 593 aaKnown RBP13.59□□□□□ -0.23
IDH3A-219ENST00000560414 ART5Q96L15 291 aa13.59□□□□□ -0.23
IDH3A-219ENST00000560414 GAL3ST4Q96RP7 486 aa13.59□□□□□ -0.23
IDH3A-219ENST00000560414 PELOQ9BRX2 385 aaKnown RBP13.59□□□□□ -0.23
IDH3A-219ENST00000560414 C12orf65Q9H3J6 166 aaKnown RBP13.59□□□□□ -0.23
IDH3A-219ENST00000560414 ANKZF1Q9H8Y5 726 aa13.59□□□□□ -0.23
IDH3A-219ENST00000560414 BRF2Q9HAW0 419 aa13.59□□□□□ -0.23
IDH3A-219ENST00000560414 GTF3C1Q12789 2109 aa13.58□□□□□ -0.23
IDH3A-219ENST00000560414 PCNX1Q96RV3 2341 aa13.58□□□□□ -0.23
IDH3A-219ENST00000560414 G3V2L1 256 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 CDC40O60508 579 aaKnown RBP eCLIP13.58□□□□□ -0.24
IDH3A-219ENST00000560414 PDE9AO76083 593 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 NADKO95544 446 aaPredicted RBP13.58□□□□□ -0.24
IDH3A-219ENST00000560414 KRT6AP02538 564 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 CLPSP04118 112 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 KRT6BP04259 564 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 CT62P0C5K7 136 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 ABOP16442 354 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 KRT15P19012 456 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 TNFRSF8P28908 595 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 SSTR4P31391 388 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 KRT6CP48668 564 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 XKP51811 444 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 CASP6P55212 293 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 SLC37A1P57057 533 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 MPEG1Q2M385 716 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 CMPK2Q5EBM0 449 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 OPN5Q6U736 354 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 RNF111Q6ZNA4 994 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 Q6ZPB1 254 aaPredicted RBP13.58□□□□□ -0.24
IDH3A-219ENST00000560414 RTL4Q6ZR62 310 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 CCNYL1Q8N7R7 359 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 OR2M7Q8NG81 312 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 OR4K14Q8NGD5 310 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 OR52N2Q8NGI0 321 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 METTL6Q8TCB7 284 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 ITLN2Q8WWU7 325 aaPredicted RBP13.58□□□□□ -0.24
IDH3A-219ENST00000560414 TM4SF18Q96CE8 201 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 L3HYPDHQ96EM0 354 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 KCNA7Q96RP8 456 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 DEFB127Q9H1M4 99 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 GSTO2Q9H4Y5 243 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 CXorf21Q9HAI6 301 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 VPS29Q9UBQ0 182 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 SUCOQ9UBS9 1254 aaKnown RBP13.58□□□□□ -0.24
IDH3A-219ENST00000560414 CES1P1Q9UKY3 287 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 TIMM22Q9Y584 194 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 PCDHA9Q9Y5H5 950 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 EML6Q6ZMW3 1958 aa13.58□□□□□ -0.24
IDH3A-219ENST00000560414 A0A1B0GTH9 108 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 FAM166BA8MTA8 275 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 GLRA3O75311 464 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 ULK1O75385 1050 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 PROCP04070 461 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 CCL3P10147 92 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 MYL2P10916 166 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 SNRPBP14678 240 aaKnown RBP13.57□□□□□ -0.24
IDH3A-219ENST00000560414 HMOX2P30519 316 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 GALNSP34059 522 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 DCTP40126 519 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 HMGCS1Q01581 520 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 PLGLB1Q02325 96 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 LCP2Q13094 533 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 FAM180BQ6P0A1 224 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 SCIMPQ6UWF3 145 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 ZYG11AQ6WRX3 759 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 C3P1Q6ZMU1 363 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 NCCRP1Q6ZVX7 275 aaPredicted RBP13.57□□□□□ -0.24
IDH3A-219ENST00000560414 SLC29A4Q7RTT9 530 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 TDRPQ86YL5 185 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 OR2W6PQ8NHA6 318 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 CHTF18Q8WVB6 975 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 SGCZQ96LD1 299 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 WWTR1Q9GZV5 400 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.57□□□□□ -0.24
IDH3A-219ENST00000560414 NMRK1Q9NWW6 199 aa13.57□□□□□ -0.24
IDH3A-219ENST00000560414 UNC79Q9P2D8 2635 aa13.56□□□□□ -0.24
IDH3A-219ENST00000560414 C1orf226A1L170 272 aa13.56□□□□□ -0.24
IDH3A-219ENST00000560414 UBFD1O14562 309 aaKnown RBP13.56□□□□□ -0.24
IDH3A-219ENST00000560414 ERAL1O75616 437 aaKnown RBP13.56□□□□□ -0.24
IDH3A-219ENST00000560414 ESRRAP11474 423 aaPredicted RBP13.56□□□□□ -0.24
IDH3A-219ENST00000560414 CPMP14384 443 aa13.56□□□□□ -0.24
IDH3A-219ENST00000560414 PORP16435 677 aaPredicted RBP13.56□□□□□ -0.24
IDH3A-219ENST00000560414 CNR1P21554 472 aa13.56□□□□□ -0.24
IDH3A-219ENST00000560414 NT5EP21589 574 aa13.56□□□□□ -0.24
IDH3A-219ENST00000560414 PIGAP37287 484 aa13.56□□□□□ -0.24
IDH3A-219ENST00000560414 FEN1P39748 380 aaKnown RBP13.56□□□□□ -0.24
IDH3A-219ENST00000560414 CCT5P48643 541 aa13.56□□□□□ -0.24
IDH3A-219ENST00000560414 DNASE1L1P49184 302 aa13.56□□□□□ -0.24
IDH3A-219ENST00000560414 FOXA1P55317 472 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms