RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 FAM180BQ6P0A1 224 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 ASPGQ86U10 573 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 ZNF761Q86XN6 746 aaPredicted RBP16.78■□□□□ 0.28
SNX1-208ENST00000559844 NAXDQ8IW45 347 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 PIK3C3Q8NEB9 887 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 GEMIN6Q8WXD5 167 aaKnown RBP16.78■□□□□ 0.28
SNX1-208ENST00000559844 THAP11Q96EK4 314 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 BBS4Q96RK4 519 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 ROGDIQ9GZN7 287 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 RBM38Q9H0Z9 239 aaKnown RBP16.78■□□□□ 0.28
SNX1-208ENST00000559844 C5AR2Q9P296 337 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 KIF17Q9P2E2 1029 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 ZNF451Q9Y4E5 1061 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 COMMD3-BMI1R4GMX3 469 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 TNFSF14O43557 240 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 PDE9AO76083 593 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 OPN1SWP03999 348 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 GPC1P35052 558 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 CCT3P49368 545 aaKnown RBP16.78■□□□□ 0.28
SNX1-208ENST00000559844 HLCSP50747 726 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 GPR18Q14330 331 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 NR0B2Q15466 257 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 HORMAD2Q8N7B1 307 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 SETD9Q8NE22 299 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 FLVCR1-AS1Q8TAF5 88 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 NCSTNQ92542 709 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 HDAC2Q92769 488 aaKnown RBP16.78■□□□□ 0.28
SNX1-208ENST00000559844 AMDHD1Q96NU7 426 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 OR2A14Q96R47 310 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 SEMA3GQ9NS98 782 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 KLHL20Q9Y2M5 609 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 ENTPD2Q9Y5L3 495 aa16.78■□□□□ 0.28
SNX1-208ENST00000559844 LY6G6EA0A0G2JKS1 128 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 OR2A25A4D2G3 310 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 TMEM247A6NEH6 219 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 CCDC160A6NGH7 325 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 C4orf51C9J302 202 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 KIF1CO43896 1103 aaKnown RBP16.77■□□□□ 0.28
SNX1-208ENST00000559844 JRKO75564 520 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 STATHP02808 62 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 UGT2B7P16662 529 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 GSTT1P30711 240 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 ANXA11P50995 505 aaKnown RBP16.77■□□□□ 0.28
SNX1-208ENST00000559844 DAPP51397 102 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 DAB2P98082 770 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 PROX2Q3B8N5 592 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.77■□□□□ 0.28
SNX1-208ENST00000559844 ZNF691Q5VV52 312 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 ANKRD34AQ69YU3 496 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 TMEM64Q6YI46 380 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 CYP4Z1Q86W10 505 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 SFXN5Q8TD22 340 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 MOAP1Q96BY2 351 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 MACROD1Q9BQ69 325 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 GLIPR2Q9H4G4 154 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 GIMAP4Q9NUV9 329 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 ACTR10Q9NZ32 417 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 NDUFAF4Q9P032 175 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 LRIT1Q9P2V4 623 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 ENTPD4Q9Y227 616 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 RNF215Q9Y6U7 377 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 U3KQA8 63 aa16.77■□□□□ 0.28
SNX1-208ENST00000559844 A0A1W2PR48 441 aa16.77■□□□□ 0.27
SNX1-208ENST00000559844 URADA6NGE7 173 aa16.77■□□□□ 0.27
SNX1-208ENST00000559844 RHPN2P1A8MT19 583 aa16.77■□□□□ 0.27
SNX1-208ENST00000559844 NUDT21O43809 227 aaKnown RBP16.77■□□□□ 0.27
SNX1-208ENST00000559844 SLC35G6P0C7Q6 338 aa16.77■□□□□ 0.27
SNX1-208ENST00000559844 GLB1P16278 677 aa16.77■□□□□ 0.27
SNX1-208ENST00000559844 RRM2P31350 389 aa16.77■□□□□ 0.27
SNX1-208ENST00000559844 RYKP34925 604 aa16.77■□□□□ 0.27
SNX1-208ENST00000559844 PIGAP37287 484 aa16.77■□□□□ 0.27
SNX1-208ENST00000559844 NCBP2P52298 156 aaKnown RBP eCLIP16.77■□□□□ 0.27
SNX1-208ENST00000559844 KEAP1Q14145 624 aa16.77■□□□□ 0.27
SNX1-208ENST00000559844 BHLHB9Q6PI77 547 aa16.77■□□□□ 0.27
SNX1-208ENST00000559844 CNDP2Q96KP4 475 aaKnown RBP16.77■□□□□ 0.27
SNX1-208ENST00000559844 SLC35G5Q96KT7 338 aa16.77■□□□□ 0.27
SNX1-208ENST00000559844 ZNF300Q96RE9 604 aaPredicted RBP16.77■□□□□ 0.27
SNX1-208ENST00000559844 FTSJ1Q9UET6 329 aa16.77■□□□□ 0.27
SNX1-208ENST00000559844 BLOC1S6Q9UL45 172 aa16.77■□□□□ 0.27
SNX1-208ENST00000559844 ATG4BQ9Y4P1 393 aa16.77■□□□□ 0.27
SNX1-208ENST00000559844 HSPE1-MOB4S4R3N1 261 aa16.77■□□□□ 0.27
SNX1-208ENST00000559844 UNC13CQ8NB66 2214 aa16.77■□□□□ 0.27
SNX1-208ENST00000559844 NUP214P35658 2090 aaPredicted RBP16.76■□□□□ 0.27
SNX1-208ENST00000559844 HEATR5BQ9P2D3 2071 aa16.76■□□□□ 0.27
SNX1-208ENST00000559844 PCNX2A6NKB5 2137 aa16.76■□□□□ 0.27
SNX1-208ENST00000559844 CPED1A4D0V7 1026 aa16.76■□□□□ 0.27
SNX1-208ENST00000559844 C2orf74A8MZ97 194 aa16.76■□□□□ 0.27
SNX1-208ENST00000559844 BCKDKO14874 412 aa16.76■□□□□ 0.27
SNX1-208ENST00000559844 AHCYL1O43865 530 aa16.76■□□□□ 0.27
SNX1-208ENST00000559844 LDOC1O95751 146 aaPredicted RBP16.76■□□□□ 0.27
SNX1-208ENST00000559844 AIFM1O95831 613 aa16.76■□□□□ 0.27
SNX1-208ENST00000559844 FESP07332 822 aa16.76■□□□□ 0.27
SNX1-208ENST00000559844 CERS1P27544 350 aa16.76■□□□□ 0.27
SNX1-208ENST00000559844 RAB8AP61006 207 aa16.76■□□□□ 0.27
SNX1-208ENST00000559844 RELAQ04206 551 aa16.76■□□□□ 0.27
SNX1-208ENST00000559844 TP53BP2Q13625 1128 aa16.76■□□□□ 0.27
SNX1-208ENST00000559844 GUSBP11Q6P575 273 aa16.76■□□□□ 0.27
SNX1-208ENST00000559844 FAHD1Q6P587 224 aa16.76■□□□□ 0.27
SNX1-208ENST00000559844 TNFAIP8L2Q6P589 184 aaPredicted RBP16.76■□□□□ 0.27
SNX1-208ENST00000559844 VN1R4Q7Z5H5 301 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms