RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 SHQ1Q6PI26 577 aaKnown RBP11.92□□□□□ -0.5
USP3-213ENST00000559711 TSEN54Q7Z6J9 526 aaKnown RBP11.92□□□□□ -0.5
USP3-213ENST00000559711 TMEM179BQ7Z7N9 219 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 CARM1Q86X55 608 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 OR4N5Q8IXE1 308 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 SHISA5Q8N114 240 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 LGI4Q8N135 537 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 TTC29Q8NA56 475 aaPredicted RBP11.92□□□□□ -0.5
USP3-213ENST00000559711 NUP43Q8NFH3 380 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 MAGEE2Q8TD90 523 aaPredicted RBP11.92□□□□□ -0.5
USP3-213ENST00000559711 SAP25Q8TEE9 199 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 XAGE5Q8WWM1 108 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 PIGKQ92643 395 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 SDCCAG3Q96C92 435 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 GIMAP5Q96F15 307 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 NRBF2Q96F24 287 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 MAGED4Q96JG8 741 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 RDH12Q96NR8 316 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 ADI1Q9BV57 179 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 OSBPL10Q9BXB5 764 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 BCL2L10Q9HD36 194 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 SOHLH2Q9NX45 425 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 VNN3Q9NY84 501 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 PTGFRNQ9P2B2 879 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 MAGED1Q9Y5V3 778 aaPredicted RBP11.92□□□□□ -0.5
USP3-213ENST00000559711 MN1Q10571 1320 aaPredicted RBP11.92□□□□□ -0.5
USP3-213ENST00000559711 TECTAO75443 2155 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 CEP192Q8TEP8 1941 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 HYKKA2RU49 373 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 TMEM221A6NGB7 291 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 FAM227AF5H4B4 570 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 M0R296 226 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 ASNA1O43681 348 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 FGF17O60258 216 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 PDE9AO76083 593 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 SLITRK5O94991 958 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 MFN2O95140 757 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 NSA2O95478 260 aaKnown RBP11.91□□□□□ -0.5
USP3-213ENST00000559711 ATP1B1P05026 303 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 UBTFL6P0CB48 400 aaPredicted RBP11.91□□□□□ -0.5
USP3-213ENST00000559711 PNLIPP16233 465 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 HOXD12P35452 270 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 SOX18P35713 384 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 SYPL1Q16563 259 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 HLA-BQ31612 363 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 WDR74Q6RFH5 385 aaPredicted RBP11.91□□□□□ -0.5
USP3-213ENST00000559711 SZRD1Q7Z422 152 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 OR2L13Q8N349 312 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 TMEM105Q8N8V8 129 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 DTWD2Q8NBA8 298 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 OR7G2Q8NG99 324 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 OR6C4Q8NGE1 309 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 OR5D16Q8NGK9 328 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 KAT2AQ92830 837 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 C16orf58Q96GQ5 468 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 CNBD2Q96M20 576 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 RBM4BQ9BQ04 359 aaKnown RBP11.91□□□□□ -0.5
USP3-213ENST00000559711 RBM4Q9BWF3 364 aaKnown RBP11.91□□□□□ -0.5
USP3-213ENST00000559711 THSD1Q9NS62 852 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 NDUFAF4Q9P032 175 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 IFT80Q9P2H3 777 aaPredicted RBP11.91□□□□□ -0.5
USP3-213ENST00000559711 TRPC4Q9UBN4 977 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 SDK1Q7Z5N4 2213 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 A0A0A6YYC8 382 aaPredicted RBP11.91□□□□□ -0.5
USP3-213ENST00000559711 BLACEA4D250 179 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 PRAMEF25A6NGN4 478 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 H3BMH7 237 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 I3L1I5 382 aaPredicted RBP11.91□□□□□ -0.5
USP3-213ENST00000559711 YKT6O15498 198 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 SLC28A2O43868 658 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 E2F6O75461 281 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 CD247P20963 164 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 FPR1P21462 350 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 DNAJA1P31689 397 aaKnown RBP11.91□□□□□ -0.5
USP3-213ENST00000559711 CNR2P34972 360 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 HSD11B2P80365 405 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 SQSTM1Q13501 440 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 GNA13Q14344 377 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 GK3PQ14409 553 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 CACNA1EQ15878 2313 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 DUSP7Q16829 419 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 AMZ1Q400G9 498 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 ZNF628Q5EBL2 1059 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 RPS26P11Q5JNZ5 115 aaPredicted RBP11.91□□□□□ -0.5
USP3-213ENST00000559711 FHL5Q5TD97 284 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 PRAMEF8Q5VWM4 474 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 PRAMEF7Q5VXH5 474 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 PRSS42Q7Z5A4 293 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 HS3ST5Q8IZT8 346 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 DHRSXQ8N5I4 330 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 Q8N9G6 341 aaPredicted RBP11.91□□□□□ -0.5
USP3-213ENST00000559711 FAM181AQ8N9Y4 354 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 OR4C6Q8NH72 309 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 SPPL2AQ8TCT8 520 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 ADAMTS18Q8TE60 1221 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 APOBEC4Q8WW27 367 aaKnown RBP11.91□□□□□ -0.5
USP3-213ENST00000559711 GEMIN6Q8WXD5 167 aaKnown RBP11.91□□□□□ -0.5
USP3-213ENST00000559711 N4BP2L2Q92802 583 aaPredicted RBP11.91□□□□□ -0.5
USP3-213ENST00000559711 COL26A1Q96A83 441 aa11.91□□□□□ -0.5
USP3-213ENST00000559711 ANKRD9Q96BM1 317 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms