RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 GALNSP34059 522 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 GPC1P35052 558 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 SOX18P35713 384 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 EMP2P54851 167 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 DNAL1Q4LDG9 190 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 RUNDC3AQ59EK9 446 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 ZNF628Q5EBL2 1059 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 NANOGP8Q6NSW7 305 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 DGAT2L6Q6ZPD8 337 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 ZNF675Q8TD23 568 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 ELP4Q96EB1 424 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 DGAT2Q96PD7 388 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 PELOQ9BRX2 385 aaKnown RBP16.92■□□□□ 0.3
CLPX-203ENST00000558958 NANOGQ9H9S0 305 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.92■□□□□ 0.3
CLPX-203ENST00000558958 C3orf18Q9UK00 162 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 ACSL6Q9UKU0 697 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 SNX8Q9Y5X2 465 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 GMEB1Q9Y692 573 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 PLOD2O00469 737 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 RAD1O60671 282 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 SLITRK5O94991 958 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 IFNA16P05015 189 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 TCN2P20062 427 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 SOAT1P35610 550 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 STAT5AP42229 794 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 MGAT2Q10469 447 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 FOXC1Q12948 553 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 PRICKLE4Q2TBC4 344 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 TMEM107Q6UX40 140 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 TMEM64Q6YI46 380 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 CLEC4FQ8N1N0 589 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 ENDOVQ8N8Q3 282 aaKnown RBP16.91■□□□□ 0.3
CLPX-203ENST00000558958 OR8J3Q8NGG0 315 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 ZFP90Q8TF47 636 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 KAT2AQ92830 837 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 AURKBQ96GD4 344 aaPredicted RBP16.91■□□□□ 0.3
CLPX-203ENST00000558958 SLC35A5Q9BS91 424 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 CRB3Q9BUF7 120 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 CXorf21Q9HAI6 301 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 MAT2BQ9NZL9 334 aa16.91■□□□□ 0.3
CLPX-203ENST00000558958 AHCTF1Q8WYP5 2266 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 C15orf38-AP3S2A0A0A6YYH1 394 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 CLIC1O00299 241 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 ALOX12BO75342 701 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 C1QCP02747 245 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 IFI6P09912 130 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 MC3RP41968 323 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 CCT3P49368 545 aaKnown RBP16.9■□□□□ 0.3
CLPX-203ENST00000558958 MRPS35P82673 323 aaKnown RBP16.9■□□□□ 0.3
CLPX-203ENST00000558958 MAP4K2Q12851 820 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 ARPINQ7Z6K5 226 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 SLC15A3Q8IY34 581 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 KIF2BQ8N4N8 673 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 OR7G2Q8NG99 324 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 OR2Y1Q8NGV0 311 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 OR5AK3PQ8NH89 298 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 SFXN5Q8TD22 340 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 RIT1Q92963 219 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 TMEM125Q96AQ2 219 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 CTHRC1Q96CG8 243 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 FAM120BQ96EK7 910 aaKnown RBP16.9■□□□□ 0.3
CLPX-203ENST00000558958 CPPED1Q9BRF8 314 aaPredicted RBP16.9■□□□□ 0.3
CLPX-203ENST00000558958 TRIM8Q9BZR9 551 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 IKZF5Q9H5V7 419 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 EPS8L2Q9H6S3 715 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 TPT1P8Q9HAU6 139 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 SPAG4Q9NPE6 437 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 NTMQ9P121 344 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 KLK13Q9UKR3 277 aa16.9■□□□□ 0.3
CLPX-203ENST00000558958 PTRH2Q9Y3E5 179 aaKnown RBP16.9■□□□□ 0.3
CLPX-203ENST00000558958 A0A087WV62 115 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 RNF103-CHMP3A0A140T963 221 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 TERTO14746 1132 aaKnown RBP16.89■□□□□ 0.29
CLPX-203ENST00000558958 GSC2O15499 205 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 BRINP1O60477 761 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 PLOD3O60568 738 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 DNAJC8O75937 253 aaPredicted RBP16.89■□□□□ 0.29
CLPX-203ENST00000558958 UMODP07911 640 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 CT62P0C5K7 136 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 SLC7A2P52569 658 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 MTPNP58546 118 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 SELPLGQ14242 412 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 ELAVL1Q15717 326 aaKnown RBP16.89■□□□□ 0.29
CLPX-203ENST00000558958 SPDYE7PQ495Y7 208 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 TRMT12Q53H54 448 aaKnown RBP16.89■□□□□ 0.29
CLPX-203ENST00000558958 RABL3Q5HYI8 236 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 FHL5Q5TD97 284 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 FAM69BQ5VUD6 431 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 FAAH2Q6GMR7 532 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 FAM111BQ6SJ93 734 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 TMEM205Q6UW68 189 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 LANCL3Q6ZV70 420 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 DTX1Q86Y01 620 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 GALNT12Q8IXK2 581 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 OR2L13Q8N349 312 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 PTPMT1Q8WUK0 201 aaPredicted RBP16.89■□□□□ 0.29
CLPX-203ENST00000558958 METTL21AQ8WXB1 218 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 MOAP1Q96BY2 351 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 NEURL3Q96EH8 262 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms