RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 P04436 131 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 MYL2P10916 166 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 CPMP14384 443 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 MAGEA5P43359 124 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 KRT6CP48668 564 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 ARFIP1P53367 373 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 FOXA1P55317 472 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 SLC37A1P57057 533 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 RASA2Q15283 850 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 LTB4RQ15722 352 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 BICRALQ6AI39 1079 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 DESI1Q6ICB0 168 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 LYPD8Q6UX82 237 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 RPRMLQ8N4K4 120 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 TMEM251Q8N6I4 163 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 OR10G3Q8NGC4 313 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 OR8K3Q8NH51 312 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 SLC22A8Q8TCC7 542 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 KLHL29Q96CT2 875 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 APIPQ96GX9 242 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 ART5Q96L15 291 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 C1QTNF3Q9BXJ4 246 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 GSTO2Q9H4Y5 243 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 ANKRA2Q9H9E1 313 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 PFDN4Q9NQP4 134 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 SACM1LQ9NTJ5 587 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 HEY2Q9UBP5 337 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 VPS29Q9UBQ0 182 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 DCDC2Q9UHG0 476 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 BCAP29Q9UHQ4 241 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 PPT2Q9UMR5 302 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 CREBBPQ92793 2442 aa11.55□□□□□ -0.56
SMAD3-208ENST00000558827 NCKAP5O14513 1909 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 ABCA12Q86UK0 2595 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 CACNA1CQ13936 2221 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 C2orf92A0A1B0GVN3 265 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 SYNDIG1LA6NDD5 238 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 G3V2L1 256 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 CDK2AP1O14519 115 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 UBFD1O14562 309 aaKnown RBP11.54□□□□□ -0.56
SMAD3-208ENST00000558827 ADAM10O14672 748 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 ULK1O75385 1050 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 PROCP04070 461 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 IL3P08700 152 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 PORP16435 677 aaPredicted RBP11.54□□□□□ -0.56
SMAD3-208ENST00000558827 HTR1EP28566 365 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 NAGLUP54802 743 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 FBXW4P57775 412 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 RAE1P78406 368 aaKnown RBP11.54□□□□□ -0.56
SMAD3-208ENST00000558827 EBPQ15125 230 aaKnown RBP11.54□□□□□ -0.56
SMAD3-208ENST00000558827 MPEG1Q2M385 716 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 SPRED3Q2MJR0 410 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.54□□□□□ -0.56
SMAD3-208ENST00000558827 ZNF791Q3KP31 576 aaPredicted RBP11.54□□□□□ -0.56
SMAD3-208ENST00000558827 HLA-DQA1Q5Y7H0 255 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 SLC22A10Q63ZE4 541 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 ZYG11AQ6WRX3 759 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 Q6ZPB1 254 aaPredicted RBP11.54□□□□□ -0.56
SMAD3-208ENST00000558827 SLC22A9Q8IVM8 553 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 GALNT12Q8IXK2 581 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 GPALPP1Q8IXQ4 340 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 SRRM1Q8IYB3 904 aaKnown RBP11.54□□□□□ -0.56
SMAD3-208ENST00000558827 ZNF808Q8N4W9 903 aaPredicted RBP11.54□□□□□ -0.56
SMAD3-208ENST00000558827 MYRIPQ8NFW9 859 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 NUBPLQ8TB37 319 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 ACMSDQ8TDX5 336 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 CHTF18Q8WVB6 975 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 EXOSC8Q96B26 276 aaKnown RBP11.54□□□□□ -0.56
SMAD3-208ENST00000558827 SPACA9Q96E40 222 aaPredicted RBP11.54□□□□□ -0.56
SMAD3-208ENST00000558827 ZNF382Q96SR6 550 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 FAM173AQ9BQD7 235 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 PELOQ9BRX2 385 aaKnown RBP11.54□□□□□ -0.56
SMAD3-208ENST00000558827 ACPTQ9BZG2 426 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 OR10A5Q9H207 317 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 EXO5Q9H790 373 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 ANKZF1Q9H8Y5 726 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 L2HGDHQ9H9P8 463 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 TNFRSF12AQ9NP84 129 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 ALKBH4Q9NXW9 302 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 ADAM29Q9UKF5 820 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 CES1P1Q9UKY3 287 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 DTX4Q9Y2E6 619 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 DLGAP4Q9Y2H0 992 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 FIS1Q9Y3D6 152 aa11.54□□□□□ -0.56
SMAD3-208ENST00000558827 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.54□□□□□ -0.56
SMAD3-208ENST00000558827 GNG14A0A1W2PPG7 69 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 C19orf84I3L1E1 186 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 ACOT7O00154 380 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 PCDH7O60245 1069 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 GLRA3O75311 464 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 GSTA1P08263 222 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 RFPL3SP0C7P2 107 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 PRF1P14222 555 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 TRPC1P48995 793 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 VSNL1P62760 191 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 KCNJ2P63252 427 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 MRPS35P82673 323 aaKnown RBP11.53□□□□□ -0.56
SMAD3-208ENST00000558827 LCP2Q13094 533 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 BIKQ13323 160 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 SPDYAQ5MJ70 313 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms