RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 OR9I1Q8NGQ6 314 aa19.83■□□□□ 0.77
CASC4-204ENST00000557945 SUN3Q8TAQ9 357 aa19.83■□□□□ 0.77
CASC4-204ENST00000557945 SNRNP27Q8WVK2 155 aaKnown RBP19.83■□□□□ 0.77
CASC4-204ENST00000557945 SENP5Q96HI0 755 aaPredicted RBP19.83■□□□□ 0.77
CASC4-204ENST00000557945 ERVK-19Q9WJR5 959 aa19.83■□□□□ 0.77
CASC4-204ENST00000557945 ZFHX4Q86UP3 3567 aa19.83■□□□□ 0.77
CASC4-204ENST00000557945 A6NL46 340 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 DDAH2O95865 285 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 SERPINA7P05543 415 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 CT62P0C5K7 136 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 ITGA3P26006 1051 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 GPC1P35052 558 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 DGKQP52824 942 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 Q0VFX4 171 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 HSPB3Q12988 150 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 SPRED3Q2MJR0 410 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 DPY19L1Q2PZI1 675 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 FAM111BQ6SJ93 734 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 ZNF551Q7Z340 670 aaPredicted RBP19.83■□□□□ 0.76
CASC4-204ENST00000557945 M1APQ8TC57 530 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 APOBEC4Q8WW27 367 aaKnown RBP19.83■□□□□ 0.76
CASC4-204ENST00000557945 KAT2AQ92830 837 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 NCLNQ969V3 563 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 THOC3Q96J01 351 aaKnown RBP19.83■□□□□ 0.76
CASC4-204ENST00000557945 ART5Q96L15 291 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 CCT8L2Q96SF2 557 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 ACSS1Q9NUB1 689 aaPredicted RBP19.83■□□□□ 0.76
CASC4-204ENST00000557945 MAT2BQ9NZL9 334 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 COPS7AQ9UBW8 275 aa19.83■□□□□ 0.76
CASC4-204ENST00000557945 A0A1W2PRB8 838 aa19.82■□□□□ 0.76
CASC4-204ENST00000557945 HRKO00198 91 aa19.82■□□□□ 0.76
CASC4-204ENST00000557945 DNAJB5O75953 348 aa19.82■□□□□ 0.76
CASC4-204ENST00000557945 MRPL19P49406 292 aaKnown RBP19.82■□□□□ 0.76
CASC4-204ENST00000557945 CCL11P51671 97 aa19.82■□□□□ 0.76
CASC4-204ENST00000557945 POLR2JP52435 117 aaKnown RBP19.82■□□□□ 0.76
CASC4-204ENST00000557945 MRPS35P82673 323 aaKnown RBP19.82■□□□□ 0.76
CASC4-204ENST00000557945 PRICKLE4Q2TBC4 344 aa19.82■□□□□ 0.76
CASC4-204ENST00000557945 COL28A1Q2UY09 1125 aa19.82■□□□□ 0.76
CASC4-204ENST00000557945 AGKQ53H12 422 aa19.82■□□□□ 0.76
CASC4-204ENST00000557945 IRAK1BP1Q5VVH5 260 aa19.82■□□□□ 0.76
CASC4-204ENST00000557945 BORAQ6PGQ7 559 aa19.82■□□□□ 0.76
CASC4-204ENST00000557945 GPR155Q7Z3F1 870 aa19.82■□□□□ 0.76
CASC4-204ENST00000557945 VWA5B2Q8N398 1253 aa19.82■□□□□ 0.76
CASC4-204ENST00000557945 ZNF321PQ8N8H1 164 aa19.82■□□□□ 0.76
CASC4-204ENST00000557945 OR8J2Q8NGG1 315 aa19.82■□□□□ 0.76
CASC4-204ENST00000557945 VMP1Q96GC9 406 aa19.82■□□□□ 0.76
CASC4-204ENST00000557945 FBXL20Q96IG2 436 aa19.82■□□□□ 0.76
CASC4-204ENST00000557945 MMP25Q9NPA2 562 aa19.82■□□□□ 0.76
CASC4-204ENST00000557945 TRBV11-1A0A0K0K1C0 115 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 FAM234BA2RU67 622 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 CFLARO15519 480 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 FRKP42685 505 aaPredicted RBP19.81■□□□□ 0.76
CASC4-204ENST00000557945 AP2B1P63010 937 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 MGAT2Q10469 447 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 MAP4K2Q12851 820 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 TBR1Q16650 682 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 ZNF628Q5EBL2 1059 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 ANXA8L1Q5VT79 327 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 APLFQ8IW19 511 aaPredicted RBP19.81■□□□□ 0.76
CASC4-204ENST00000557945 GALNT16Q8N428 558 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 KIF2BQ8N4N8 673 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 VPS37AQ8NEZ2 397 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 OR1N1Q8NGS0 311 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 ZNF675Q8TD23 568 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 ZNF721Q8TF20 911 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 NUDT9Q9BW91 350 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 PRORYQ9H606 182 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 ZNF385DQ9H6B1 395 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 CCDC167Q9P0B6 97 aa19.81■□□□□ 0.76
CASC4-204ENST00000557945 PPIEQ9UNP9 301 aaKnown RBP19.81■□□□□ 0.76
CASC4-204ENST00000557945 C6orf47O95873 294 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 IL6P05231 212 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 PGRP06401 933 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 ITGAMP11215 1152 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 SSTR4P31391 388 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 CLCN2P51788 898 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 GPR143P51810 404 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 RAPSNQ13702 412 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 TRMT12Q53H54 448 aaKnown RBP19.8■□□□□ 0.76
CASC4-204ENST00000557945 TMEM107Q6UX40 140 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 RNF111Q6ZNA4 994 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 PIGWQ7Z7B1 504 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 ANKRD46Q86W74 232 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 CPSF7Q8N684 471 aaKnown RBP19.8■□□□□ 0.76
CASC4-204ENST00000557945 APCDD1LQ8NCL9 501 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 OR5P2Q8WZ92 322 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 EXTL1Q92935 676 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 MAGED4Q96JG8 741 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 OR52E6Q96RD3 313 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 LHPPQ9H008 270 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 SAR1AQ9NR31 198 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 BCAP29Q9UHQ4 241 aa19.8■□□□□ 0.76
CASC4-204ENST00000557945 A8MUI8 341 aa19.79■□□□□ 0.76
CASC4-204ENST00000557945 NR5A2O00482 541 aa19.79■□□□□ 0.76
CASC4-204ENST00000557945 FAM107AO95990 144 aa19.79■□□□□ 0.76
CASC4-204ENST00000557945 IGKV3-11P04433 115 aa19.79■□□□□ 0.76
CASC4-204ENST00000557945 ABCB1P08183 1280 aaPredicted RBP19.79■□□□□ 0.76
CASC4-204ENST00000557945 MC3RP41968 323 aa19.79■□□□□ 0.76
CASC4-204ENST00000557945 CDK9P50750 372 aaKnown RBP19.79■□□□□ 0.76
CASC4-204ENST00000557945 WNT3P56703 355 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms