RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 CCT7Q99832 543 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 EBPLQ9BY08 206 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 CXorf21Q9HAI6 301 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 LRTM1Q9HBL6 345 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 TMBIM4Q9HC24 238 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 PFDN4Q9NQP4 134 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 GIMAP4Q9NUV9 329 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 C1orf109Q9NX04 203 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 EHD3Q9NZN3 535 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 UTS2RQ9UKP6 389 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 ERVK-19Q9WJR5 959 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 CCL27Q9Y4X3 112 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 DNAJC15Q9Y5T4 150 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 ZNF462Q96JM2 2506 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 EML6Q6ZMW3 1958 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 WDR91A4D1P6 747 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 A8MVJ9 347 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 TMEM114B3SHH9 223 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 PRKNO60260 465 aaPredicted RBP11.59□□□□□ -0.55
SLIRP-211ENST00000557623 SLC25A12O75746 678 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 OR2J2O76002 312 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 NEURL1O76050 574 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 HSPA4LO95757 839 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 ATP1B1P05026 303 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 SERPINE1P05121 402 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 SP1P08047 785 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 GRK2P25098 689 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 SLC18A1P54219 525 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 C2orf80Q0P641 193 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 CHI3L2Q15782 390 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 MPEG1Q2M385 716 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 HHATQ5VTY9 493 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 SLC25A25Q6KCM7 469 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 NOXRED1Q6NXP6 359 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 IKBIPQ70UQ0 350 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 DDIASQ8IXT1 998 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 KIRREL3Q8IZU9 778 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 OR7G1Q8NGA0 311 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 SLC22A8Q8TCC7 542 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 GRHL3Q8TE85 626 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 FAR1Q8WVX9 515 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 ZBTB9Q96C00 473 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 PKNOX2Q96KN3 472 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 CLMPQ9H6B4 373 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 MYNNQ9NPC7 610 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 HPF1Q9NWY4 346 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 HEY2Q9UBP5 337 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 ENTPD4Q9Y227 616 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 NTNG1Q9Y2I2 539 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 TMED5Q9Y3A6 229 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 POLR3HQ9Y535 204 aaPredicted RBP11.59□□□□□ -0.55
SLIRP-211ENST00000557623 CFAP46Q8IYW2 2715 aa11.59□□□□□ -0.55
SLIRP-211ENST00000557623 TMEM200CA6NKL6 621 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 TCP11X1B4DZS4 312 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 HRKO00198 91 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 WWP2O00308 870 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 LINC00032P0C843 101 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 DDCP20711 480 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 FEN1P39748 380 aaKnown RBP11.58□□□□□ -0.56
SLIRP-211ENST00000557623 SLC37A1P57057 533 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 ABCE1P61221 599 aaKnown RBP11.58□□□□□ -0.56
SLIRP-211ENST00000557623 FUT7Q11130 342 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 MAP4K2Q12851 820 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 ELOAQ14241 798 aaKnown RBP11.58□□□□□ -0.56
SLIRP-211ENST00000557623 KIAA0040Q15053 153 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 MAPKAPK3Q16644 382 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 PRICKLE4Q2TBC4 344 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 UGT3A2Q3SY77 523 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 ZNF468Q5VIY5 522 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-211ENST00000557623 OPN5Q6U736 354 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 Q6ZSR9 355 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 C9orf40Q8IXQ3 194 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 DND1Q8IYX4 353 aaKnown RBP11.58□□□□□ -0.56
SLIRP-211ENST00000557623 MMP21Q8N119 569 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 CYP4Z2PQ8N1L4 340 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 LRRC25Q8N386 305 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-211ENST00000557623 SLC15A4Q8N697 577 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 CDC26Q8NHZ8 85 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 AGR3Q8TD06 166 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 CNRIP1Q96F85 164 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-211ENST00000557623 PPP3R2Q96LZ3 170 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 ZNF681Q96N22 645 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 RASL10BQ96S79 203 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 PAIP2Q9BPZ3 127 aaKnown RBP11.58□□□□□ -0.56
SLIRP-211ENST00000557623 BRINP2Q9C0B6 783 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 TUBB1Q9H4B7 451 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 LIN28AQ9H9Z2 209 aaKnown RBP11.58□□□□□ -0.56
SLIRP-211ENST00000557623 TIMMDC1Q9NPL8 285 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 MIEF1Q9NQG6 463 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 SLC35C2Q9NQQ7 365 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 KLHL1Q9NR64 748 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 OLAHQ9NV23 265 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 ZDHHC2Q9UIJ5 367 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 ERVK-11Q9UQG0 969 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 CFL2Q9Y281 166 aa11.58□□□□□ -0.56
SLIRP-211ENST00000557623 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-211ENST00000557623 KLF13Q9Y2Y9 288 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-211ENST00000557623 A0A1W2PS29 197 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 TMEM120BA0PK00 339 aa11.57□□□□□ -0.56
SLIRP-211ENST00000557623 TMEM233B4DJY2 109 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms