RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 A0A0A6YYC8 382 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-230ENST00000557427 I3L1I5 382 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-230ENST00000557427 P2RX6O15547 441 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 LCMT2O60294 686 aaKnown RBP11.7□□□□□ -0.54
SHMT2-230ENST00000557427 STK16O75716 305 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 WDPCPO95876 746 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 CDH1P12830 882 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 EPB42P16452 691 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 HRH2P25021 359 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 MEF2AQ02078 507 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-230ENST00000557427 EMX2Q04743 252 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 TFF3Q07654 80 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 CEACAM7Q14002 265 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 RPS6KA2Q15349 733 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 ATP6AP1LQ52LC2 224 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 TCHHL1Q5QJ38 904 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-230ENST00000557427 C6orf136Q5SQH8 315 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 PRMT9Q6P2P2 845 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 BLOC1S3Q6QNY0 202 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 C3P1Q6ZMU1 363 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 Q6ZSR9 355 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 BIVMQ86UB2 503 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 LAPTM4BQ86VI4 370 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 SIRT6Q8N6T7 355 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 OR9I1Q8NGQ6 314 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 OR2T11Q8NH01 316 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 STT3BQ8TCJ2 826 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 CA5BP1Q8WTZ4 195 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 FKBP10Q96AY3 582 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 MIEF2Q96C03 454 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 CCDC124Q96CT7 223 aaKnown RBP11.7□□□□□ -0.54
SHMT2-230ENST00000557427 CDK15Q96Q40 435 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 SGPP1Q9BX95 441 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.7□□□□□ -0.54
SHMT2-230ENST00000557427 SLC26A1Q9H2B4 701 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 ENAMQ9NRM1 1142 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 ZIM2Q9NZV7 527 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 TRPC4Q9UBN4 977 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 ZNF282Q9UDV7 671 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-230ENST00000557427 GIMAP2Q9UG22 337 aa11.7□□□□□ -0.54
SHMT2-230ENST00000557427 INTS1Q8N201 2190 aaKnown RBP11.69□□□□□ -0.54
SHMT2-230ENST00000557427 VSTM2BA6NLU5 285 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 SLC28A1O00337 649 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 NR5A2O00482 541 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 TXNDC9O14530 226 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 CFLARO15519 480 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 FOXS1O43638 330 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 HPP00738 406 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 SERPIND1P05546 499 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 CELA2AP08217 269 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 ZGLP1P0C6A0 271 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 ARL1P40616 181 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-230ENST00000557427 SLC6A12P48065 614 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 HTR6P50406 440 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 RPS15AP62244 130 aaKnown RBP11.69□□□□□ -0.54
SHMT2-230ENST00000557427 SNRPNP63162 240 aaKnown RBP11.69□□□□□ -0.54
SHMT2-230ENST00000557427 MAT1AQ00266 395 aaKnown RBP11.69□□□□□ -0.54
SHMT2-230ENST00000557427 RELAQ04206 551 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 FOLH1Q04609 750 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 KLC1Q07866 573 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 SYT16Q17RD7 645 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 SPATS1Q496A3 300 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 GGTA1PQ4G0N0 100 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 LCTLQ6UWM7 567 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 DOLPP1Q86YN1 238 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 CHERPQ8IWX8 916 aaKnown RBP11.69□□□□□ -0.54
SHMT2-230ENST00000557427 DMRTC2Q8IXT2 367 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-230ENST00000557427 KLHDC8AQ8IYD2 350 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 SLC26A7Q8TE54 656 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 THAP3Q8WTV1 239 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-230ENST00000557427 PHF10Q8WUB8 498 aaKnown RBP11.69□□□□□ -0.54
SHMT2-230ENST00000557427 NRG4Q8WWG1 115 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 ATL1Q8WXF7 558 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 C8orf44Q96CB5 159 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 FBXL8Q96CD0 374 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 MAGED4Q96JG8 741 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 PPP3R2Q96LZ3 170 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 GPR137Q96N19 417 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 HOPXQ9BPY8 73 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-230ENST00000557427 ZNF559Q9BR84 538 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 TACO1Q9BSH4 297 aaKnown RBP11.69□□□□□ -0.54
SHMT2-230ENST00000557427 HAUS8Q9BT25 410 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 CRB3Q9BUF7 120 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 TSPAN10Q9H1Z9 355 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-230ENST00000557427 SPAG4Q9NPE6 437 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 SLC52A3Q9NQ40 469 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 C3orf18Q9UK00 162 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 MRPS2Q9Y399 296 aaKnown RBP11.69□□□□□ -0.54
SHMT2-230ENST00000557427 CCL27Q9Y4X3 112 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 CPAMD8Q8IZJ3 1885 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 GTF3C1Q12789 2109 aa11.69□□□□□ -0.54
SHMT2-230ENST00000557427 KCNE1BA0A087WTH5 132 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 NKX2-6A6NCS4 301 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 LSM1O15116 133 aaKnown RBP11.68□□□□□ -0.54
SHMT2-230ENST00000557427 ANGPT2O15123 496 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 RGS14O43566 566 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 OR1F1O43749 312 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 BCAS2O75934 225 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-230ENST00000557427 CLDN9O95484 217 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 GRK3P35626 688 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms