RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 IL3P08700 152 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 HK2P52789 917 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 RBPJQ06330 500 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 MRPL49Q13405 166 aaKnown RBP13.08□□□□□ -0.32
SLIRP-207ENST00000556831 HSP90B2PQ58FF3 399 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 SH2D4BQ5SQS7 431 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 ZCCHC23Q6ZST2 131 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 TRIM46Q7Z4K8 759 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 GALNTL5Q7Z4T8 443 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 ARMC10Q8N2F6 343 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 LRRC25Q8N386 305 aaPredicted RBP13.08□□□□□ -0.32
SLIRP-207ENST00000556831 ST6GALNAC3Q8NDV1 305 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 FAM76AQ8TAV0 307 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 NUBPLQ8TB37 319 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 PRR7Q8TB68 274 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 AGR3Q8TD06 166 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 ZNF721Q8TF20 911 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 NR4A3Q92570 626 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 TM4SF18Q96CE8 201 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 PGM2Q96G03 612 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 PHF12Q96QT6 1004 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 ZNF223Q9UK11 482 aaPredicted RBP13.08□□□□□ -0.32
SLIRP-207ENST00000556831 ACTL7BQ9Y614 415 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 ZFHX3Q15911 3703 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 SPTBN1Q01082 2364 aaKnown RBP13.07□□□□□ -0.32
SLIRP-207ENST00000556831 TYROBPO43914 113 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 NME2P1O60361 137 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 NEURL1O76050 574 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 WISP2O76076 250 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 AGFG2O95081 481 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 HSPA4LO95757 839 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 BPGMP07738 259 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 ZNF24P17028 368 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 POU3F2P20265 443 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-207ENST00000556831 NME2P22392 152 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 ELAVL4P26378 380 aaKnown RBP13.07□□□□□ -0.32
SLIRP-207ENST00000556831 FEN1P39748 380 aaKnown RBP13.07□□□□□ -0.32
SLIRP-207ENST00000556831 SERPINB4P48594 390 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 ALDH6A1Q02252 535 aaKnown RBP13.07□□□□□ -0.32
SLIRP-207ENST00000556831 ARL13AQ5H913 290 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-207ENST00000556831 GALNT18Q6P9A2 607 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 IL20RBQ6UXL0 311 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 CLYBLQ8N0X4 340 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 TAGAPQ8N103 731 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 VWA5B2Q8N398 1253 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 FAM26EQ8N5C1 309 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 ZNF321PQ8N8H1 164 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 C16orf78Q8WTQ4 265 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 EXOSC8Q96B26 276 aaKnown RBP13.07□□□□□ -0.32
SLIRP-207ENST00000556831 SCMH1Q96GD3 660 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 METTL2AQ96IZ6 378 aaKnown RBP13.07□□□□□ -0.32
SLIRP-207ENST00000556831 RASL10BQ96S79 203 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 PAIP2Q9BPZ3 127 aaKnown RBP13.07□□□□□ -0.32
SLIRP-207ENST00000556831 HES7Q9BYE0 225 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 VIPAS39Q9H9C1 493 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 LIN28AQ9H9Z2 209 aaKnown RBP13.07□□□□□ -0.32
SLIRP-207ENST00000556831 CXorf21Q9HAI6 301 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 LRTM1Q9HBL6 345 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 RYDENQ9NUL5 291 aaKnown RBP13.07□□□□□ -0.32
SLIRP-207ENST00000556831 CFL2Q9Y281 166 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 TRAF6Q9Y4K3 522 aa13.07□□□□□ -0.32
SLIRP-207ENST00000556831 POLR3HQ9Y535 204 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-207ENST00000556831 C2orf92A0A1B0GVN3 265 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 WDR91A4D1P6 747 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 WASHC1A8K0Z3 465 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 CAPN14A8MX76 684 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 PRKNO60260 465 aaPredicted RBP13.06□□□□□ -0.32
SLIRP-207ENST00000556831 IGKV3-11P04433 115 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 ATP1B1P05026 303 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 RNF224P0DH78 156 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 CREB1P16220 341 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 DDX5P17844 614 aaKnown RBP13.06□□□□□ -0.32
SLIRP-207ENST00000556831 NTSP30990 170 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 SOX3P41225 446 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 TMED10P49755 219 aaKnown RBP13.06□□□□□ -0.32
SLIRP-207ENST00000556831 NRG3P56975 720 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 PMP22Q01453 160 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 C2orf80Q0P641 193 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 MPEG1Q2M385 716 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 ZNF468Q5VIY5 522 aaPredicted RBP13.06□□□□□ -0.32
SLIRP-207ENST00000556831 HHATQ5VTY9 493 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 KANK2Q63ZY3 851 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 GFRALQ6UXV0 394 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 RTL4Q6ZR62 310 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 IKBIPQ70UQ0 350 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.06□□□□□ -0.32
SLIRP-207ENST00000556831 EXOC3L1Q86VI1 746 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 C9orf40Q8IXQ3 194 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 DND1Q8IYX4 353 aaKnown RBP13.06□□□□□ -0.32
SLIRP-207ENST00000556831 KIRREL3Q8IZU9 778 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 POGLUT1Q8NBL1 392 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 OR7G1Q8NGA0 311 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 DOK4Q8TEW6 326 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 TWIST2Q8WVJ9 160 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 UCN3Q969E3 161 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 ZBTB9Q96C00 473 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 TAAR6Q96RI8 345 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 BBS4Q96RK4 519 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 SLX1AQ9BQ83 275 aa13.06□□□□□ -0.32
SLIRP-207ENST00000556831 WWTR1Q9GZV5 400 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms