RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 MAT2BQ9NZL9 334 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.53□□□□□ -0.72
FOXN3-212ENST00000556541 C5AR2Q9P296 337 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 PCDHGB4Q9UN71 923 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 G3BP2Q9UN86 482 aaKnown RBP10.53□□□□□ -0.72
FOXN3-212ENST00000556541 CHD8Q9HCK8 2581 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 USP24Q9UPU5 2620 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 ATRXP46100 2492 aa10.52□□□□□ -0.72
FOXN3-212ENST00000556541 TRBV5-3A0A0A0MS03 114 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 IGHV1-45A0A0A0MS14 117 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 CCT8L1PA6NM43 557 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 OR6C76A6NM76 312 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 ZNF891A8MT65 544 aaPredicted RBP10.52□□□□□ -0.73
FOXN3-212ENST00000556541 NR5A2O00482 541 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 SOCS6O14544 535 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 ANGPT2O15123 496 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 OR10H2O60403 315 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 HNRNPCL1O60812 293 aaKnown RBP10.52□□□□□ -0.73
FOXN3-212ENST00000556541 CDC123O75794 336 aaPredicted RBP10.52□□□□□ -0.73
FOXN3-212ENST00000556541 HPP00738 406 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 IGKV3-11P04433 115 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 COX6A1P12074 109 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 ICAM2P13598 275 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 LIFP15018 202 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 PPIBP23284 216 aaKnown RBP10.52□□□□□ -0.73
FOXN3-212ENST00000556541 PTPN6P29350 595 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 EIF2S3P41091 472 aaKnown RBP10.52□□□□□ -0.73
FOXN3-212ENST00000556541 GPR143P51810 404 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 NCBP2P52298 156 aaKnown RBP eCLIP10.52□□□□□ -0.73
FOXN3-212ENST00000556541 DGKQP52824 942 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 NME5P56597 212 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 OR4D2P58180 307 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 DUSP2Q05923 314 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 VAC14Q08AM6 782 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 SF3A3Q12874 501 aaKnown RBP eCLIP10.52□□□□□ -0.73
FOXN3-212ENST00000556541 PCOLCEQ15113 449 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 TIGD2Q4W5G0 525 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 SFT2D3Q587I9 215 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 FHL5Q5TD97 284 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 C6orf163Q5TEZ5 329 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 MFSD4BQ5TF39 518 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 PLAG1Q6DJT9 500 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 ANKRD26P1Q6NSI1 321 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 ZCCHC12Q6PEW1 402 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 BHLHB9Q6PI77 547 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 KIRREL2Q6UWL6 708 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 RIPOR1Q6ZS17 1223 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 GK5Q6ZS86 529 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 NDUFAF7Q7L592 441 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 TMEM151BQ8IW70 566 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 CCDC116Q8IYX3 515 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 ARMC10Q8N2F6 343 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 VWA5B2Q8N398 1253 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 TRIML2Q8N7C3 387 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 PCYOX1LQ8NBM8 494 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 C17orf47Q8NEP4 570 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 NFAM1Q8NET5 270 aaPredicted RBP10.52□□□□□ -0.73
FOXN3-212ENST00000556541 PTPMT1Q8WUK0 201 aaPredicted RBP10.52□□□□□ -0.73
FOXN3-212ENST00000556541 HOXB13Q92826 284 aaPredicted RBP10.52□□□□□ -0.73
FOXN3-212ENST00000556541 RIT1Q92963 219 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 CIDECQ96AQ7 238 aaPredicted RBP10.52□□□□□ -0.73
FOXN3-212ENST00000556541 ELP4Q96EB1 424 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 IMMP1LQ96LU5 166 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 TRIM4Q9C037 500 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 SIRT3Q9NTG7 399 aaPredicted RBP10.52□□□□□ -0.73
FOXN3-212ENST00000556541 GIN1Q9NXP7 522 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 ARMCX1Q9P291 453 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 TAGLN3Q9UI15 199 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 C19orf53Q9UNZ5 99 aaPredicted RBP10.52□□□□□ -0.73
FOXN3-212ENST00000556541 CFL2Q9Y281 166 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 ACACAQ13085 2346 aa10.52□□□□□ -0.73
FOXN3-212ENST00000556541 C15orf38-AP3S2A0A0A6YYH1 394 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 FBP2O00757 339 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 RFXANKO14593 260 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 EMC8O43402 210 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 COQ9O75208 318 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 KCNH1O95259 989 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 DDAH2O95865 285 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 S1PR1P21453 382 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 CALB2P22676 271 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 UQCRC2P22695 453 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 SOX18P35713 384 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 FEN1P39748 380 aaKnown RBP10.51□□□□□ -0.73
FOXN3-212ENST00000556541 UCNP55089 124 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 SOX8P57073 446 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 HBA1P69905 142 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 PRR5P85299 388 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 TRMT5Q32P41 509 aaKnown RBP10.51□□□□□ -0.73
FOXN3-212ENST00000556541 VPS26BQ4G0F5 336 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 EXOSC6Q5RKV6 272 aaKnown RBP10.51□□□□□ -0.73
FOXN3-212ENST00000556541 PAPD4Q6PIY7 484 aaKnown RBP10.51□□□□□ -0.73
FOXN3-212ENST00000556541 ARPINQ7Z6K5 226 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 MRGPREQ86SM8 312 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 SNX32Q86XE0 403 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 OR4N5Q8IXE1 308 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 B3GNT7Q8NFL0 401 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 OR11G2Q8NGC1 345 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 OR56A1Q8NGH5 318 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 OR1N1Q8NGS0 311 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 M1APQ8TC57 530 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms