RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 PFDN4Q9NQP4 134 aa14.08□□□□□ -0.16
ACTN1-217ENST00000556203 HPF1Q9NWY4 346 aa14.08□□□□□ -0.16
ACTN1-217ENST00000556203 C1orf109Q9NX04 203 aa14.08□□□□□ -0.16
ACTN1-217ENST00000556203 ERVK-11Q9UQG0 969 aa14.08□□□□□ -0.16
ACTN1-217ENST00000556203 NPIPB8E9PQR5 432 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 ZNF354AO60765 605 aaPredicted RBP14.07□□□□□ -0.16
ACTN1-217ENST00000556203 SEC22BO75396 215 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 ZWINTO95229 277 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 ATP1B1P05026 303 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 DHRS4L1P0CG22 281 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 NEFHP12036 1026 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 EDN3P14138 238 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 PRPH2P23942 346 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 PTGER1P34995 402 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 DUSP2Q05923 314 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 FUT7Q11130 342 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 MPP2Q14168 576 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 ELOAQ14241 798 aaKnown RBP14.07□□□□□ -0.16
ACTN1-217ENST00000556203 KIAA0040Q15053 153 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 CHI3L2Q15782 390 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 MPEG1Q2M385 716 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 EIF2S3LQ2VIR3 472 aaKnown RBP14.07□□□□□ -0.16
ACTN1-217ENST00000556203 UGT3A2Q3SY77 523 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 PIGGQ5H8A4 983 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 NOXRED1Q6NXP6 359 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 IL20RBQ6UXL0 311 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 Q6ZSR9 355 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 SLC29A4Q7RTT9 530 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 MDGA2Q7Z553 956 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.07□□□□□ -0.16
ACTN1-217ENST00000556203 HOMEZQ8IX15 550 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 DDIASQ8IXT1 998 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 LRRC25Q8N386 305 aaPredicted RBP14.07□□□□□ -0.16
ACTN1-217ENST00000556203 FAM98AQ8NCA5 519 aaKnown RBP14.07□□□□□ -0.16
ACTN1-217ENST00000556203 ST6GALNAC3Q8NDV1 305 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 DNAJB8Q8NHS0 232 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 PRR7Q8TB68 274 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 ZNF681Q96N22 645 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 BRINP2Q9C0B6 783 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 WWTR1Q9GZV5 400 aa14.07□□□□□ -0.16
ACTN1-217ENST00000556203 ASPDHA6ND91 283 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 OR6C76A6NM76 312 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 PIP5K1BO14986 540 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 BIRC5O15392 142 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 SERPINE1P05121 402 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 DDCP20711 480 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 MST1P26927 711 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 C2orf80Q0P641 193 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 CASP8Q14790 479 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 EBPQ15125 230 aaKnown RBP14.06□□□□□ -0.16
ACTN1-217ENST00000556203 LTB4RQ15722 352 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 PRICKLE4Q2TBC4 344 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 CES4AQ5XG92 561 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 FAM111BQ6SJ93 734 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 OPN5Q6U736 354 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 VWA5B2Q8N398 1253 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 ANKRD42Q8N9B4 389 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 ADCY4Q8NFM4 1077 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 OR7G1Q8NGA0 311 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 SLC22A8Q8TCC7 542 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 METTL2AQ96IZ6 378 aaKnown RBP14.06□□□□□ -0.16
ACTN1-217ENST00000556203 OR10A5Q9H207 317 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 TMBIM4Q9HC24 238 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 MYNNQ9NPC7 610 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 TIMMDC1Q9NPL8 285 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 SLC35C2Q9NQQ7 365 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 GIMAP4Q9NUV9 329 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 MAT2BQ9NZL9 334 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 EHD3Q9NZN3 535 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 ZDHHC2Q9UIJ5 367 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 ENTPD4Q9Y227 616 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 KLF13Q9Y2Y9 288 aaPredicted RBP14.06□□□□□ -0.16
ACTN1-217ENST00000556203 SHANK1Q9Y566 2161 aa14.06□□□□□ -0.16
ACTN1-217ENST00000556203 NBASA2RRP1 2371 aa14.05□□□□□ -0.16
ACTN1-217ENST00000556203 HELZ2Q9BYK8 2649 aaKnown RBP14.05□□□□□ -0.16
ACTN1-217ENST00000556203 C2orf92A0A1B0GVN3 265 aa14.05□□□□□ -0.16
ACTN1-217ENST00000556203 LSM1O15116 133 aaKnown RBP14.05□□□□□ -0.16
ACTN1-217ENST00000556203 ITM2AO43736 263 aa14.05□□□□□ -0.16
ACTN1-217ENST00000556203 LYPLA1O75608 230 aaPredicted RBP14.05□□□□□ -0.16
ACTN1-217ENST00000556203 NADKO95544 446 aaPredicted RBP14.05□□□□□ -0.16
ACTN1-217ENST00000556203 HSPA4LO95757 839 aa14.05□□□□□ -0.16
ACTN1-217ENST00000556203 TDGF1P3P51864 188 aa14.05□□□□□ -0.16
ACTN1-217ENST00000556203 RPL38P63173 70 aaKnown RBP14.05□□□□□ -0.16
ACTN1-217ENST00000556203 MGAT2Q10469 447 aa14.05□□□□□ -0.16
ACTN1-217ENST00000556203 MAP4K2Q12851 820 aa14.05□□□□□ -0.16
ACTN1-217ENST00000556203 FHL5Q5TD97 284 aa14.05□□□□□ -0.16
ACTN1-217ENST00000556203 FAM71E1Q6IPT2 247 aa14.05□□□□□ -0.16
ACTN1-217ENST00000556203 IKBIPQ70UQ0 350 aa14.05□□□□□ -0.16
ACTN1-217ENST00000556203 TICAM1Q8IUC6 712 aa14.05□□□□□ -0.16
ACTN1-217ENST00000556203 SULF2Q8IWU5 870 aa14.05□□□□□ -0.16
ACTN1-217ENST00000556203 CCDC116Q8IYX3 515 aa14.05□□□□□ -0.16
ACTN1-217ENST00000556203 SAMD14Q8IZD0 417 aaPredicted RBP14.05□□□□□ -0.16
ACTN1-217ENST00000556203 FAM26EQ8N5C1 309 aa14.05□□□□□ -0.16
ACTN1-217ENST00000556203 CPSF7Q8N684 471 aaKnown RBP14.05□□□□□ -0.16
ACTN1-217ENST00000556203 ZNF615Q8N8J6 731 aa14.05□□□□□ -0.16
ACTN1-217ENST00000556203 OR9A2Q8NGT5 310 aa14.05□□□□□ -0.16
ACTN1-217ENST00000556203 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.05□□□□□ -0.16
ACTN1-217ENST00000556203 FRMD6Q96NE9 622 aa14.05□□□□□ -0.16
ACTN1-217ENST00000556203 PAIP2Q9BPZ3 127 aaKnown RBP14.05□□□□□ -0.16
ACTN1-217ENST00000556203 ZNF395Q9H8N7 513 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms