RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 GKAP1Q5VSY0 366 aaPredicted RBP7.13□□□□□ -1.27
TDP1-214ENST00000556063 CPZQ66K79 652 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 ANKRD26P1Q6NSI1 321 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 BORAQ6PGQ7 559 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 BHLHB9Q6PI77 547 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 MSANTD1Q6ZTZ1 278 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 SHISA5Q8N114 240 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 VWA5B2Q8N398 1253 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 SLC5A8Q8N695 610 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 OR7G1Q8NGA0 311 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 OR7A2PQ8NGA2 310 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 OR5L2Q8NGL0 311 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 ZNF675Q8TD23 568 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 C10orf82Q8WW14 230 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 OR5P2Q8WZ92 322 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 UCN3Q969E3 161 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 PPWD1Q96BP3 646 aaKnown RBP7.13□□□□□ -1.27
TDP1-214ENST00000556063 SENP5Q96HI0 755 aaPredicted RBP7.13□□□□□ -1.27
TDP1-214ENST00000556063 FBXL20Q96IG2 436 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 MARK4Q96L34 752 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 ZNF681Q96N22 645 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 CNTNAP3BQ96NU0 1288 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 OR52E6Q96RD3 313 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 CCT8L2Q96SF2 557 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 CNPPD1Q9BV87 410 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 DEFB126Q9BYW3 111 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 CNTNAP3Q9BZ76 1288 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 OR8D2Q9GZM6 311 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 ING2Q9H160 280 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 CLMPQ9H6B4 373 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 RMND5AQ9H871 391 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 CXorf21Q9HAI6 301 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 C3orf14Q9HBI5 128 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 NEUROD4Q9HD90 331 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 MMP25Q9NPA2 562 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 RYDENQ9NUL5 291 aaKnown RBP7.13□□□□□ -1.27
TDP1-214ENST00000556063 FAM120CQ9NX05 1096 aaKnown RBP7.13□□□□□ -1.27
TDP1-214ENST00000556063 PRODH2Q9UF12 536 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 PPIEQ9UNP9 301 aaKnown RBP7.13□□□□□ -1.27
TDP1-214ENST00000556063 EXO1Q9UQ84 846 aaKnown RBP7.13□□□□□ -1.27
TDP1-214ENST00000556063 ARL2BPQ9Y2Y0 163 aa7.13□□□□□ -1.27
TDP1-214ENST00000556063 COPG1Q9Y678 874 aaKnown RBP7.13□□□□□ -1.27
TDP1-214ENST00000556063 DCHS1Q96JQ0 3298 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 SPTA1P02549 2419 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 AKAP13Q12802 2813 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 A0A087WV62 115 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 OR6C76A6NM76 312 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 MKRN2OSH3BPM6 223 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 RNASET2O00584 256 aaKnown RBP7.12□□□□□ -1.27
TDP1-214ENST00000556063 SLC22A2O15244 555 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 SHOX2O60902 331 aaPredicted RBP7.12□□□□□ -1.27
TDP1-214ENST00000556063 COQ9O75208 318 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 FAM107AO95990 144 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 PGRP06401 933 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 GPX3P22352 226 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 FRKP42685 505 aaPredicted RBP7.12□□□□□ -1.27
TDP1-214ENST00000556063 EFNA3P52797 238 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 SOX8P57073 446 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 PRR5P85299 388 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 RHDQ02161 417 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 SF3A3Q12874 501 aaKnown RBP eCLIP7.12□□□□□ -1.27
TDP1-214ENST00000556063 HSPB3Q12988 150 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 PRICKLE4Q2TBC4 344 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 ZNF750Q32MQ0 723 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 SPDYE7PQ495Y7 208 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 AGKQ53H12 422 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 SPANXN4Q5MJ08 99 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 HLA-DQA1Q5Y7H0 255 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 CGB2Q6NT52 195 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 PAOXQ6QHF9 649 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 HSDL2Q6YN16 418 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 RNF111Q6ZNA4 994 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 SLC29A4Q7RTT9 530 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 GALNT16Q8N428 558 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 CPSF7Q8N684 471 aaKnown RBP7.12□□□□□ -1.27
TDP1-214ENST00000556063 TRIML2Q8N7C3 387 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 ANKS4BQ8N8V4 417 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 OR1N1Q8NGS0 311 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 OR9A2Q8NGT5 310 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 OR8K3Q8NH51 312 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 SLC2A12Q8TD20 617 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 TSPEARQ8WU66 669 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 PTPMT1Q8WUK0 201 aaPredicted RBP7.12□□□□□ -1.27
TDP1-214ENST00000556063 NCLNQ969V3 563 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 CIDECQ96AQ7 238 aaPredicted RBP7.12□□□□□ -1.27
TDP1-214ENST00000556063 MOAP1Q96BY2 351 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 THOC3Q96J01 351 aaKnown RBP7.12□□□□□ -1.27
TDP1-214ENST00000556063 AMDHD1Q96NU7 426 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 HS3ST6Q96QI5 342 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 WDR77Q9BQA1 342 aaPredicted RBP7.12□□□□□ -1.27
TDP1-214ENST00000556063 ARHGAP9Q9BRR9 750 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 LHPPQ9H008 270 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 GLIPR2Q9H4G4 154 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 DDX18Q9NVP1 670 aaKnown RBP7.12□□□□□ -1.27
TDP1-214ENST00000556063 MAT2BQ9NZL9 334 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 CCDC167Q9P0B6 97 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 ABI3Q9P2A4 366 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 PTGFRNQ9P2B2 879 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 ERVK-19Q9WJR5 959 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 KCNMB2Q9Y691 235 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms