RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 PVRP15151 417 aa1.59□□□□□ -2.15
SRP54-207ENST00000555535 ZP3P21754 424 aa1.59□□□□□ -2.15
SRP54-207ENST00000555535 RPA1P27694 616 aa1.59□□□□□ -2.15
SRP54-207ENST00000555535 AXLP30530 894 aa1.59□□□□□ -2.15
SRP54-207ENST00000555535 MSLNQ13421 630 aaPredicted RBP1.59□□□□□ -2.15
SRP54-207ENST00000555535 KYAT1Q16773 422 aa1.59□□□□□ -2.15
SRP54-207ENST00000555535 WSCD2Q2TBF2 565 aa1.59□□□□□ -2.15
SRP54-207ENST00000555535 MS4A13Q5J8X5 152 aa1.59□□□□□ -2.15
SRP54-207ENST00000555535 PAGE2BQ5JRK9 111 aa1.59□□□□□ -2.15
SRP54-207ENST00000555535 SPATA46Q5T0L3 261 aa1.59□□□□□ -2.15
SRP54-207ENST00000555535 SHEQ5VZ18 495 aa1.59□□□□□ -2.15
SRP54-207ENST00000555535 APOOLQ6UXV4 268 aa1.59□□□□□ -2.15
SRP54-207ENST00000555535 CYP4V2Q6ZWL3 525 aaPredicted RBP1.59□□□□□ -2.15
SRP54-207ENST00000555535 CHST3Q7LGC8 479 aa1.59□□□□□ -2.15
SRP54-207ENST00000555535 PHLDB2Q86SQ0 1253 aa1.59□□□□□ -2.15
SRP54-207ENST00000555535 ICA1LQ8NDH6 482 aa1.59□□□□□ -2.15
SRP54-207ENST00000555535 ZNF540Q8NDQ6 660 aa1.59□□□□□ -2.15
SRP54-207ENST00000555535 SLC25A38Q96DW6 304 aa1.59□□□□□ -2.15
SRP54-207ENST00000555535 BSCL2Q96G97 398 aaPredicted RBP1.59□□□□□ -2.15
SRP54-207ENST00000555535 NUDT16L1Q9BRJ7 211 aaKnown RBP1.59□□□□□ -2.15
SRP54-207ENST00000555535 INPP5KQ9BT40 448 aa1.59□□□□□ -2.15
SRP54-207ENST00000555535 ZNF282Q9UDV7 671 aaPredicted RBP1.59□□□□□ -2.15
SRP54-207ENST00000555535 CCL27Q9Y4X3 112 aa1.59□□□□□ -2.15
SRP54-207ENST00000555535 IGKV2D-24A0A075B6R9 120 aa1.58□□□□□ -2.16
SRP54-207ENST00000555535 SH3PXD2BA1X283 911 aa1.58□□□□□ -2.16
SRP54-207ENST00000555535 LRCOL1A6NCL2 159 aa1.58□□□□□ -2.16
SRP54-207ENST00000555535 G3V3Y1 287 aa1.58□□□□□ -2.16
SRP54-207ENST00000555535 SNAI2O43623 268 aa1.58□□□□□ -2.16
SRP54-207ENST00000555535 LETM1O95202 739 aaPredicted RBP1.58□□□□□ -2.16
SRP54-207ENST00000555535 MMP10P09238 476 aa1.58□□□□□ -2.16
SRP54-207ENST00000555535 ALPIP09923 528 aa1.58□□□□□ -2.16
SRP54-207ENST00000555535 PTPN4P29074 926 aa1.58□□□□□ -2.16
SRP54-207ENST00000555535 OR3A4PP47883 348 aa1.58□□□□□ -2.16
SRP54-207ENST00000555535 P2RY14Q15391 338 aa1.58□□□□□ -2.16
SRP54-207ENST00000555535 PRR4Q16378 134 aa1.58□□□□□ -2.16
SRP54-207ENST00000555535 CFAP161Q6P656 301 aa1.58□□□□□ -2.16
SRP54-207ENST00000555535 SIGLEC15Q6ZMC9 328 aa1.58□□□□□ -2.16
SRP54-207ENST00000555535 C17orf64Q86WR6 236 aa1.58□□□□□ -2.16
SRP54-207ENST00000555535 RELL2Q8NC24 303 aaPredicted RBP1.58□□□□□ -2.16
SRP54-207ENST00000555535 ATG101Q9BSB4 218 aa1.58□□□□□ -2.16
SRP54-207ENST00000555535 GPR173Q9NS66 373 aa1.58□□□□□ -2.16
SRP54-207ENST00000555535 DPM3Q9P2X0 92 aa1.58□□□□□ -2.16
SRP54-207ENST00000555535 FGD5Q6ZNL6 1462 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 GTF3C1Q12789 2109 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 ANKRD63C9JTQ0 380 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 WDHD1O75717 1129 aaPredicted RBP1.57□□□□□ -2.16
SRP54-207ENST00000555535 CCDC175P0C221 793 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 CCDC166P0CW27 439 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 CT45A10P0DMU9 189 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 EZRP15311 586 aaKnown RBP1.57□□□□□ -2.16
SRP54-207ENST00000555535 ACP1P24666 158 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 UCP1P25874 307 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 RBMXP38159 391 aaKnown RBP1.57□□□□□ -2.16
SRP54-207ENST00000555535 PMELP40967 661 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 NPBWR1P48145 328 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 NPY4RP50391 375 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 MEF2DQ14814 521 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 SPHARQ15513 63 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 TCP11X2Q5H9J9 407 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 TAF3Q5VWG9 929 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 SNRNP48Q6IEG0 339 aaKnown RBP1.57□□□□□ -2.16
SRP54-207ENST00000555535 RHBDD2Q6NTF9 364 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 MOB2Q70IA6 237 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 SPATA21Q7Z572 469 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 KIAA0895Q8NCT3 520 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 ADAMTS16Q8TE57 1224 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 TFB1MQ8WVM0 346 aaKnown RBP1.57□□□□□ -2.16
SRP54-207ENST00000555535 PRCCQ92733 491 aaPredicted RBP1.57□□□□□ -2.16
SRP54-207ENST00000555535 BIRC7Q96CA5 298 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 CAPNS2Q96L46 248 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 RASL10BQ96S79 203 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 SSX3Q99909 188 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 SLC25A19Q9HC21 320 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 DNAJC11Q9NVH1 559 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 RNF115Q9Y4L5 304 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 FLVCR1Q9Y5Y0 555 aa1.57□□□□□ -2.16
SRP54-207ENST00000555535 ARHGAP21Q5T5U3 1957 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 LRRK1Q38SD2 2015 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 IGKV2-28A0A075B6P5 120 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 SLC17A2O00624 439 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 PSMD3O43242 534 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 ZNF324O75467 553 aaPredicted RBP1.56□□□□□ -2.16
SRP54-207ENST00000555535 NUDT14O95848 222 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 IGKV2D-28P01615 120 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 RPN1P04843 607 aaKnown RBP1.56□□□□□ -2.16
SRP54-207ENST00000555535 WNT2P09544 360 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 PTAFRP25105 342 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 OR1D4P47884 311 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 CAV2P51636 162 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 SLC3A1Q07837 685 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 MAPRE1Q15691 268 aaKnown RBP1.56□□□□□ -2.16
SRP54-207ENST00000555535 MPPED2Q15777 294 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 ZNF528Q3MIS6 628 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 RPUSD3Q6P087 351 aaKnown RBP1.56□□□□□ -2.16
SRP54-207ENST00000555535 ADAMTSL5Q6ZMM2 481 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 Q6ZRG5 221 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 Q8NFD4 153 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 KIF18AQ8NI77 898 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 FBXO30Q8TB52 745 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 GOLGA5Q8TBA6 731 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms