RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 HNRNPFP52597 415 aaKnown RBP10.21□□□□□ -0.77
SHMT2-218ENST00000555213 BTG2P78543 158 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 FOLH1Q04609 750 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 MAPRE2Q15555 327 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 EXT1Q16394 746 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 MPEG1Q2M385 716 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 SPANXN4Q5MJ08 99 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 C6orf163Q5TEZ5 329 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 SLC2A7Q6PXP3 512 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 LANCL3Q6ZV70 420 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 APLFQ8IW19 511 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-218ENST00000555213 SAMD14Q8IZD0 417 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-218ENST00000555213 FAM9CQ8IZT9 166 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 SHISA5Q8N114 240 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 DPP10Q8N608 796 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 GLB1L3Q8NCI6 653 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-218ENST00000555213 TMEM52Q8NDY8 209 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 OR7A2PQ8NGA2 310 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 GTF2H4Q92759 462 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 TESCQ96BS2 214 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 DGAT2Q96PD7 388 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 ZNF700Q9H0M5 742 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 ING2Q9H160 280 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 ZNF160Q9HCG1 818 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 ADAP2Q9NPF8 381 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 ATP13A2Q9NQ11 1180 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 EHD3Q9NZN3 535 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 ATP6V1HQ9UI12 483 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 ENTPD4Q9Y227 616 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 PCDHA9Q9Y5H5 950 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 KCNMB2Q9Y691 235 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 SCN3AQ9NY46 2000 aa10.21□□□□□ -0.78
SHMT2-218ENST00000555213 OR2W5A6NFC9 320 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 SAGE2PA6NJ88 616 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 BBIP1A8MTZ0 92 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 MRASO14807 208 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 AKAP10O43572 662 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 FGF17O60258 216 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 LDB3O75112 727 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 PRKRAO75569 313 aaKnown RBP10.2□□□□□ -0.78
SHMT2-218ENST00000555213 SEC24DO94855 1032 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-218ENST00000555213 GPR75O95800 540 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 ALPPP05187 535 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 IL6P05231 212 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 LAMP1P11279 417 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 TNNI3P19429 210 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 DDCP20711 480 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 PRPS1L1P21108 318 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 ITGA3P26006 1051 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 RPL3P39023 403 aaKnown RBP10.2□□□□□ -0.78
SHMT2-218ENST00000555213 NUDT2P50583 147 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 KCNK10P57789 538 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 PSME3P61289 254 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 ELF3P78545 371 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-218ENST00000555213 ID2Q02363 134 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 PDE7AQ13946 482 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 CEACAM7Q14002 265 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 PCOLCEQ15113 449 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 ELAVL1Q15717 326 aaKnown RBP10.2□□□□□ -0.78
SHMT2-218ENST00000555213 TBR1Q16650 682 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 FAM174BQ3ZCQ3 159 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 ZNF385BQ569K4 471 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 FREM2Q5SZK8 3169 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 CPZQ66K79 652 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 SLC48A1Q6P1K1 146 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 PAPD4Q6PIY7 484 aaKnown RBP10.2□□□□□ -0.78
SHMT2-218ENST00000555213 CAMKMTQ7Z624 323 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 TMEM151BQ8IW70 566 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 MSRB3Q8IXL7 192 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 KBTBD2Q8IY47 623 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 DEFB107AQ8IZN7 70 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 PGAM4Q8N0Y7 254 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 MMP21Q8N119 569 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 OR4K14Q8NGD5 310 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 OR14A16Q8NHC5 309 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 DAZLQ92904 295 aaKnown RBP10.2□□□□□ -0.78
SHMT2-218ENST00000555213 GFM2Q969S9 779 aaKnown RBP10.2□□□□□ -0.78
SHMT2-218ENST00000555213 LRRC58Q96CX6 371 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 RBM18Q96H35 190 aaKnown RBP10.2□□□□□ -0.78
SHMT2-218ENST00000555213 CRELD1Q96HD1 420 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 CDRT15Q96T59 188 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 THTPAQ9BU02 230 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 ALOXE3Q9BYJ1 711 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 NECTIN3Q9NQS3 549 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 PNO1Q9NRX1 252 aaKnown RBP10.2□□□□□ -0.78
SHMT2-218ENST00000555213 SLC6A13Q9NSD5 602 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 GMPR2Q9P2T1 348 aaKnown RBP10.2□□□□□ -0.78
SHMT2-218ENST00000555213 CD300AQ9UGN4 299 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 UTS2RQ9UKP6 389 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 CLCA3PQ9Y6N3 262 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 ZNF780BQ9Y6R6 833 aa10.2□□□□□ -0.78
SHMT2-218ENST00000555213 TRBV5-3A0A0A0MS03 114 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 IGHV3-20A0A0C4DH32 117 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 DYTNA2CJ06 578 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 CCDC154A6NI56 674 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 WASHC1A8K0Z3 465 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 A8MUI8 341 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 MKRN2OSH3BPM6 223 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 ERVH48-1M5A8F1 160 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 CFLARO15519 480 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms