RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 SLC35A5Q9BS91 424 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 VN1R1Q9GZP7 353 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 PCDHAC1Q9H158 963 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 GPATCH2Q9NW75 528 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 IFT80Q9P2H3 777 aaPredicted RBP10.09□□□□□ -0.79
TDP1-211ENST00000555178 PCDHGA8Q9Y5G5 932 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 ZNF780BQ9Y6R6 833 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 ZZEF1O43149 2961 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 IGLV3-12A0A075B6K2 115 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 LOC101059948A0A1B0GTJ6 334 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 A8MUA0 341 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 DNAJA2O60884 412 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 KLF7O75840 302 aaPredicted RBP10.08□□□□□ -0.8
TDP1-211ENST00000555178 ONECUT2O95948 504 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 CT62P0C5K7 136 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 ZGLP1P0C6A0 271 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 CPMP14384 443 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 MC3RP41968 323 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 TRPC1P48995 793 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 CORO7P57737 925 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 SKP1P63208 163 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 EIF3IQ13347 325 aaKnown RBP10.08□□□□□ -0.8
TDP1-211ENST00000555178 CEBPEQ15744 281 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 MINDY4Q4G0A6 757 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 MFSD4BQ5TF39 518 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 YOD1Q5VVQ6 348 aaPredicted RBP10.08□□□□□ -0.8
TDP1-211ENST00000555178 ANGPTL8Q6UXH0 198 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 FBXW8Q8N3Y1 598 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 OR10A6Q8NH74 314 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 GOT1L1Q8NHS2 421 aaPredicted RBP10.08□□□□□ -0.8
TDP1-211ENST00000555178 ZFP90Q8TF47 636 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 OR5P2Q8WZ92 322 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 HOPXQ9BPY8 73 aaPredicted RBP10.08□□□□□ -0.8
TDP1-211ENST00000555178 DPH2Q9BQC3 489 aaPredicted RBP10.08□□□□□ -0.8
TDP1-211ENST00000555178 THUMPD3Q9BV44 507 aaKnown RBP10.08□□□□□ -0.8
TDP1-211ENST00000555178 ASPSCR1Q9BZE9 553 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 NDE1Q9NXR1 346 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 CD300AQ9UGN4 299 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 MKL2Q9ULH7 1088 aa10.08□□□□□ -0.8
TDP1-211ENST00000555178 RNF103-CHMP3A0A140T963 221 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 VSTM2BA6NLU5 285 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 CLIC1O00299 241 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 GPR75O95800 540 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 UMODP07911 640 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 NUDT7P0C024 238 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 CSNK2A2P19784 350 aaPredicted RBP10.07□□□□□ -0.8
TDP1-211ENST00000555178 GPC1P35052 558 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 GSK3BP49841 420 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 MVDP53602 400 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 MS4A2Q01362 244 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 LIPEQ05469 1076 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.07□□□□□ -0.82e-6■■■■□ 26.1
TDP1-211ENST00000555178 FAM111BQ6SJ93 734 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 C6orf15Q6UXA7 325 aaPredicted RBP10.07□□□□□ -0.8
TDP1-211ENST00000555178 GPR155Q7Z3F1 870 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 LRRC25Q8N386 305 aaPredicted RBP10.07□□□□□ -0.8
TDP1-211ENST00000555178 ZNF321PQ8N8H1 164 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 C8orf44Q96CB5 159 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 TPT1P8Q9HAU6 139 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 PRTFDC1Q9NRG1 225 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 ACSS1Q9NUB1 689 aaPredicted RBP10.07□□□□□ -0.8
TDP1-211ENST00000555178 EGFL7Q9UHF1 273 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 PRPF19Q9UMS4 504 aaKnown RBP10.07□□□□□ -0.8
TDP1-211ENST00000555178 VPS4AQ9UN37 437 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 PCDHGB4Q9UN71 923 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 CDC14AQ9UNH5 594 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 L3MBTL1Q9Y468 752 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 CFAP73A6NFT4 308 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 TERTO14746 1132 aaKnown RBP10.07□□□□□ -0.8
TDP1-211ENST00000555178 PRKNO60260 465 aaPredicted RBP10.07□□□□□ -0.8
TDP1-211ENST00000555178 NPPAP01160 153 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 OR4D2P58180 307 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 WDR53Q7Z5U6 358 aaPredicted RBP10.07□□□□□ -0.8
TDP1-211ENST00000555178 ENDOVQ8N8Q3 282 aaKnown RBP10.07□□□□□ -0.8
TDP1-211ENST00000555178 OR7G2Q8NG99 324 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 OR8J3Q8NGG0 315 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 FBXO30Q8TB52 745 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 TANKQ92844 425 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 FAM120BQ96EK7 910 aaKnown RBP10.07□□□□□ -0.8
TDP1-211ENST00000555178 LRFN5Q96NI6 719 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 PTCHD1Q96NR3 888 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 PHF12Q96QT6 1004 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 ALOXE3Q9BYJ1 711 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 SERHL2Q9H4I8 314 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 ALG2Q9H553 416 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 KAT8Q9H7Z6 458 aaKnown RBP10.07□□□□□ -0.8
TDP1-211ENST00000555178 GIMAP4Q9NUV9 329 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 ZNF282Q9UDV7 671 aaPredicted RBP10.07□□□□□ -0.8
TDP1-211ENST00000555178 IL17BQ9UHF5 180 aa10.07□□□□□ -0.8
TDP1-211ENST00000555178 IGKV3D-11A0A0A0MRZ8 115 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 CTNSO60931 367 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 NCK1P16333 377 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 PORP16435 677 aaPredicted RBP10.06□□□□□ -0.8
TDP1-211ENST00000555178 WT1P19544 449 aaPredicted RBP10.06□□□□□ -0.8
TDP1-211ENST00000555178 TCN2P20062 427 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 MPIP34949 423 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 CHI3L1P36222 383 aaPredicted RBP10.06□□□□□ -0.8
TDP1-211ENST00000555178 PRKAG1P54619 331 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 MGAT2Q10469 447 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 DUSP8Q13202 625 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms