RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 SDC1P18827 310 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 NT5EP21589 574 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 SERPINB5P36952 375 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 SLC1A6P48664 564 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 MRPS35P82673 323 aaKnown RBP11.46□□□□□ -0.57
SYNE2-214ENST00000554928 ZNF763Q0D2J5 394 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 C2orf80Q0P641 193 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 STX3Q13277 289 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 EXOSC7Q15024 291 aaKnown RBP11.46□□□□□ -0.57
SYNE2-214ENST00000554928 TLR1Q15399 786 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 OR1C1Q15619 314 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 PDCD2Q16342 344 aaPredicted RBP11.46□□□□□ -0.57
SYNE2-214ENST00000554928 SPRED3Q2MJR0 410 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 ZNF385BQ569K4 471 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 HSDL2Q6YN16 418 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 HDXQ7Z353 690 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 TICAM1Q8IUC6 712 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 LGI4Q8N135 537 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 SUN3Q8TAQ9 357 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 ATP6V1G3Q96LB4 118 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 FAIM2Q9BWQ8 316 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 STMN4Q9H169 189 aaPredicted RBP11.46□□□□□ -0.57
SYNE2-214ENST00000554928 MYNNQ9NPC7 610 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 KLHL1Q9NR64 748 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 MAT2BQ9NZL9 334 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 TEKT2Q9UIF3 430 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 UTS2RQ9UKP6 389 aa11.46□□□□□ -0.57
SYNE2-214ENST00000554928 TRAV17A0A0B4J275 112 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 J3QKU1 62 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 AKAP10O43572 662 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 PRAMEF2O60811 474 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 GUCY1B2O75343 617 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 OR6B1O95007 311 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 LRATO95237 230 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 NADKO95544 446 aaPredicted RBP11.45□□□□□ -0.58
SYNE2-214ENST00000554928 CHEK2O96017 543 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 COX7A2P14406 83 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 DRD2P14416 443 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 PCSK2P16519 638 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 TRHRP34981 398 aaPredicted RBP11.45□□□□□ -0.58
SYNE2-214ENST00000554928 UQCRFS1P47985 274 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 SLC37A1P57057 533 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 OC90Q02509 493 aaPredicted RBP11.45□□□□□ -0.58
SYNE2-214ENST00000554928 MPEG1Q2M385 716 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 PRICKLE4Q2TBC4 344 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 TRMT12Q53H54 448 aaKnown RBP11.45□□□□□ -0.58
SYNE2-214ENST00000554928 TMEM64Q6YI46 380 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 MDGA2Q7Z553 956 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 GALNT12Q8IXK2 581 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 CCDC116Q8IYX3 515 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 ZNF615Q8N8J6 731 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 OR9A2Q8NGT5 310 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 TSSK3Q96PN8 268 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 RASL10BQ96S79 203 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 UTP23Q9BRU9 249 aaKnown RBP11.45□□□□□ -0.58
SYNE2-214ENST00000554928 C1orf50Q9BV19 199 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 BRINP2Q9C0B6 783 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 LRFN1Q9P244 771 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 MAP10Q9P2G4 905 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 MYOTQ9UBF9 498 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 RAP2CQ9Y3L5 183 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 RELNP78509 3460 aa11.45□□□□□ -0.58
SYNE2-214ENST00000554928 NBASA2RRP1 2371 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 SNNO75324 88 aaPredicted RBP11.44□□□□□ -0.58
SYNE2-214ENST00000554928 CBX7O95931 251 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 NEFHP12036 1026 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 BCKDHAP12694 445 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 CSNK2A2P19784 350 aaPredicted RBP11.44□□□□□ -0.58
SYNE2-214ENST00000554928 DDCP20711 480 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 GRK2P25098 689 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 GALNSP34059 522 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 SOX3P41225 446 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 HLCSP50747 726 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 SLC18A1P54219 525 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 FUT7Q11130 342 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 EBPQ15125 230 aaKnown RBP11.44□□□□□ -0.58
SYNE2-214ENST00000554928 ZNF628Q5EBL2 1059 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 ZNF766Q5HY98 468 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 C6orf136Q5SQH8 315 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 LYPD8Q6UX82 237 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 RNF111Q6ZNA4 994 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 LRRC25Q8N386 305 aaPredicted RBP11.44□□□□□ -0.58
SYNE2-214ENST00000554928 FAM76AQ8TAV0 307 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 GRHL3Q8TE85 626 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 KAT2AQ92830 837 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 SCMH1Q96GD3 660 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 GAL3ST4Q96RP7 486 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 PELOQ9BRX2 385 aaKnown RBP11.44□□□□□ -0.58
SYNE2-214ENST00000554928 TRIM45Q9H8W5 580 aaPredicted RBP11.44□□□□□ -0.58
SYNE2-214ENST00000554928 PFDN4Q9NQP4 134 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 SLC35C2Q9NQQ7 365 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 ARGLU1Q9NWB6 273 aaPredicted RBP11.44□□□□□ -0.58
SYNE2-214ENST00000554928 NKIRAS1Q9NYS0 192 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 ZNF639Q9UID6 485 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 HAO1Q9UJM8 370 aa11.44□□□□□ -0.58
SYNE2-214ENST00000554928 SHANK1Q9Y566 2161 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 A0A0G2JMM0 328 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 A0A1W2PPB8 328 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 A0A1W2PRS3 328 aa11.43□□□□□ -0.58
SYNE2-214ENST00000554928 SYNDIG1LA6NDD5 238 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms