RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 RNF31Q96EP0 1072 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 FAM46AQ96IP4 442 aaKnown RBP11.25□□□□□ -0.61
XRCC3-208ENST00000554811 FYTTD1Q96QD9 318 aaKnown RBP11.25□□□□□ -0.61
XRCC3-208ENST00000554811 MAPKAP1Q9BPZ7 522 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 TREX2Q9BQ50 279 aaPredicted RBP11.25□□□□□ -0.61
XRCC3-208ENST00000554811 WACQ9BTA9 647 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 GABARAPL1Q9H0R8 117 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 OR51V1Q9H2C8 321 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 PTGFRNQ9P2B2 879 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 TEKT2Q9UIF3 430 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 PCDHGA3Q9Y5H0 932 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 FAM240BA0A1B0GVZ2 78 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 A0A1W2PS29 197 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 IGLON5A6NGN9 336 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 SMLR1H3BR10 107 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 QSOX1O00391 747 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 PITPNM1O00562 1244 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 NDUFS4O43181 175 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 PRKYO43930 277 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 CSO75390 466 aaKnown RBP11.25□□□□□ -0.61
XRCC3-208ENST00000554811 MRPL3P09001 348 aaKnown RBP11.25□□□□□ -0.61
XRCC3-208ENST00000554811 NTSP30990 170 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 PUM1Q14671 1186 aaKnown RBP eCLIP11.25□□□□□ -0.61
XRCC3-208ENST00000554811 FBXO43Q4G163 708 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 IL20RBQ6UXL0 311 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 ZNF367Q7RTV3 350 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 ABI3BPQ7Z7G0 1075 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 C12orf40Q86WS4 652 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 C17orf50Q8WW18 174 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 ECHDC3Q96DC8 303 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 ZNF486Q96H40 463 aaPredicted RBP11.25□□□□□ -0.61
XRCC3-208ENST00000554811 TMEM245Q9H330 911 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 IGFLR1Q9H665 355 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 DEC1Q9P2X7 70 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 ENTPD4Q9Y227 616 aa11.25□□□□□ -0.61
XRCC3-208ENST00000554811 RP1L1Q8IWN7 2480 aaPredicted RBP11.25□□□□□ -0.61
XRCC3-208ENST00000554811 CCNYL3P0C7X3 344 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 HOXB3P14651 431 aaPredicted RBP11.24□□□□□ -0.61
XRCC3-208ENST00000554811 IFNA8P32881 189 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 SOX9P48436 509 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 PRLHRP49683 370 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 PLET1Q6UQ28 207 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 ATP6V1C2Q8NEY4 427 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 OR4F15Q8NGB8 312 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 OR10G6Q8NH81 332 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 OR8D1Q8WZ84 308 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 SMPDL3AQ92484 453 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 DNAJA3Q96EY1 480 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 TRMT61AQ96FX7 289 aaKnown RBP11.24□□□□□ -0.61
XRCC3-208ENST00000554811 NELL2Q99435 816 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 SLC23A2Q9UGH3 650 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 NAALAD2Q9Y3Q0 740 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 RPL36Q9Y3U8 105 aaKnown RBP11.24□□□□□ -0.61
XRCC3-208ENST00000554811 PCYT1BQ9Y5K3 369 aaPredicted RBP11.24□□□□□ -0.61
XRCC3-208ENST00000554811 CSNK1G3Q9Y6M4 447 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 FAM170BA6NMN3 283 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 UQCRC2P22695 453 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 RGS8P57771 180 aaPredicted RBP11.24□□□□□ -0.61
XRCC3-208ENST00000554811 FCHO2Q0JRZ9 810 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 FADDQ13158 208 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 DHCR24Q15392 516 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 SSX1Q16384 188 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 ZNF362Q5T0B9 420 aaPredicted RBP11.24□□□□□ -0.61
XRCC3-208ENST00000554811 PSRC1Q6PGN9 363 aaPredicted RBP11.24□□□□□ -0.61
XRCC3-208ENST00000554811 GALNT13Q8IUC8 556 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 SIX5Q8N196 739 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 MINDY2Q8NBR6 621 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 SMAP2Q8WU79 429 aaPredicted RBP11.24□□□□□ -0.61
XRCC3-208ENST00000554811 ZBED6CLQ96FA7 236 aaPredicted RBP11.24□□□□□ -0.61
XRCC3-208ENST00000554811 CRELD1Q96HD1 420 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 CPNE5Q9HCH3 593 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 RANGRFQ9HD47 186 aaPredicted RBP11.24□□□□□ -0.61
XRCC3-208ENST00000554811 RPRD1BQ9NQG5 326 aaKnown RBP11.24□□□□□ -0.61
XRCC3-208ENST00000554811 ZNF624Q9P2J8 865 aaPredicted RBP11.24□□□□□ -0.61
XRCC3-208ENST00000554811 PCDHGB1Q9Y5G3 927 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 ARAFP10398 606 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 ADH5P11766 374 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 TIE1P35590 1138 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 XCR1P46094 333 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 MAN2A2P49641 1150 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 SCN1BQ07699 218 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 KRR1Q13601 381 aaKnown RBP11.24□□□□□ -0.61
XRCC3-208ENST00000554811 QPRTQ15274 297 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 GPR68Q15743 365 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 SNAP47Q5SQN1 464 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 PLEKHM3Q6ZWE6 761 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 MARCH9Q86YJ5 346 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 PLPP6Q8IY26 295 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 OR51G2Q8NGK0 314 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 OR56A3Q8NH54 315 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 UBE2E3Q969T4 207 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 ZNF689Q96CS4 500 aaPredicted RBP11.24□□□□□ -0.61
XRCC3-208ENST00000554811 MAGEB10Q96LZ2 347 aaPredicted RBP11.24□□□□□ -0.61
XRCC3-208ENST00000554811 DPH7Q9BTV6 452 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 RETREG1Q9H6L5 497 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 BRF2Q9HAW0 419 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 RC3H2Q9HBD1 1191 aaKnown RBP11.24□□□□□ -0.61
XRCC3-208ENST00000554811 ENOPH1Q9UHY7 261 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 PLEKHM1Q9Y4G2 1056 aa11.24□□□□□ -0.61
XRCC3-208ENST00000554811 SLC5A10A0PJK1 596 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms