RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 HORMAD1Q86X24 394 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CIR1Q86X95 450 aaPredicted RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 P3H2Q8IVL5 708 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 ZDHHC21Q8IVQ6 265 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 SLC30A8Q8IWU4 369 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 RBFAQ8N0V3 343 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CADM3Q8N126 398 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CDYL2Q8N8U2 506 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 IL17RCQ8NAC3 791 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 DENND6BQ8NEG7 585 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 GRPEL2Q8TAA5 225 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 Q8TCH9 128 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CD200R1Q8TD46 325 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 OVCA2Q8WZ82 227 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 TRIM63Q969Q1 353 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 LGALS12Q96DT0 336 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 ZNF419Q96HQ0 510 aaPredicted RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 SPATA17Q96L03 361 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 PPM1MQ96MI6 270 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 SNX18Q96RF0 628 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 KCNA7Q96RP8 456 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 GPHA2Q96T91 129 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CSF3RQ99062 836 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 GPR21Q99679 349 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 HEPHQ9BQS7 1158 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CPPED1Q9BRF8 314 aaPredicted RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 TRAF4Q9BUZ4 470 aaPredicted RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CINPQ9BW66 212 aaPredicted RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 GABARAPL3Q9BY60 117 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 SLIRPQ9GZT3 109 aaKnown RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CCDC90BQ9GZT6 254 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 REEP1Q9H902 201 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 PDFQ9HBH1 243 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 LRTM1Q9HBL6 345 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 IL1RAPQ9NPH3 570 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 ACOT13Q9NPJ3 140 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CCDC177Q9NQR7 707 aaPredicted RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 FAM120CQ9NX05 1096 aaKnown RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 KIF17Q9P2E2 1029 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 OPTCQ9UBM4 332 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 UBA2Q9UBT2 640 aaPredicted RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 DKK4Q9UBT3 224 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 SEC14L4Q9UDX3 406 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 PRSS50Q9UI38 385 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 ST6GALNAC2Q9UJ37 374 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 NDRG4Q9ULP0 352 aaKnown RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 SNX6Q9UNH7 406 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 WBP11Q9Y2W2 641 aaKnown RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 PKP3Q9Y446 797 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 KLK4Q9Y5K2 254 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 HEMK1Q9Y5R4 338 aaPredicted RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 SNX10Q9Y5X0 201 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 WNT6Q9Y6F9 365 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 A0A075B6Q4 140 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 TCRBV21S2A2A0A5A6 115 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 ILVBLA1L0T0 632 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 OR2A25A4D2G3 310 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 ARRDC5A6NEK1 342 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 AGAP5A6NIR3 686 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 TTC34A8MYJ7 566 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 J3KR12 359 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 CDC7O00311 574 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 HAT1O14929 419 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 ADAMDEC1O15204 470 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 FFAR2O15552 330 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 KDELR3O43731 214 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 AIREO43918 545 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 UGDHO60701 494 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 CDC14BO60729 498 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 TRIM3O75382 744 aaPredicted RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 SEC22BO75396 215 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 MYO1DO94832 1006 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 INMTO95050 263 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 LATS1O95835 1130 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 MOCS2O96007 188 aaPredicted RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 C9P02748 559 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 APODP05090 189 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 ABCB1P08183 1280 aaPredicted RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 F7P08709 466 aaPredicted RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 ANXA8P13928 327 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 HSD3B1P14060 373 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 SLC2A4P14672 509 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 CD36P16671 472 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 IL7RP16871 459 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 ZNF24P17028 368 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 ITGA2P17301 1181 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 CTPS1P17812 591 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 TSPAN8P19075 237 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 PRPS1L1P21108 318 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 PSMB9P28065 219 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 FMO4P31512 558 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 S100A3P33764 101 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 RPL3P39023 403 aaKnown RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 ARL1P40616 181 aaPredicted RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 YAP1P46937 504 aaKnown RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 SLC11A2P49281 568 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 CDKN1CP49918 316 aaPredicted RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 HNMTP50135 292 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 PNLIPRP1P54315 467 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 ERVPABLB-1P60509 514 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms