RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 CSAG2Q9Y5P2 127 aa2.02□□□□□ -2.09
SRP54-204ENST00000553923 COL4A4P53420 1690 aaPredicted RBP2.02□□□□□ -2.09
SRP54-204ENST00000553923 A0A075B6Q4 140 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 A0A1W2PPI3 338 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 A0A1W2PRB8 838 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 HELTA6NFD8 242 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 ZNF716A6NP11 495 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 ANKRD66B4E2M5 251 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 WRBO00258 174 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 PDXKO00764 312 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 LSM1O15116 133 aaKnown RBP2.01□□□□□ -2.09
SRP54-204ENST00000553923 SCO2O43819 266 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 NME2P1O60361 137 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 RHBDL1O75783 438 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 ANP32DO95626 131 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 WDPCPO95876 746 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 FGF4P08620 206 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 ZNF735P0CB33 412 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 GSTT2P0CG29 244 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 GSTT2BP0CG30 244 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 CEACAM1P13688 526 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 F3P13726 295 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 CBLP22681 906 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 EPHA2P29317 976 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 SHC1P29353 583 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 OTX2P32243 289 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 CA8P35219 290 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 RDXP35241 583 aaKnown RBP2.01□□□□□ -2.09
SRP54-204ENST00000553923 MAP2K2P36507 400 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 SYKP43405 635 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 TNFRSF4P43489 277 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 RPL21P46778 160 aaKnown RBP2.01□□□□□ -2.09
SRP54-204ENST00000553923 VAMP7P51809 220 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 CBX1P83916 185 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 KLC1Q07866 573 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 TGM3Q08188 693 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 RIGQ13278 110 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 NFATC2Q13469 925 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 KIR2DS3Q14952 304 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 HEPACAMQ14CZ8 416 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 ODF4Q2M2E3 257 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 ASPRV1Q53RT3 343 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 ARMC12Q5T9G4 340 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 TAF3Q5VWG9 929 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 LYPLAL1Q5VWZ2 237 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 HIST2H2AA3Q6FI13 130 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 ZNF770Q6IQ21 691 aaPredicted RBP2.01□□□□□ -2.09
SRP54-204ENST00000553923 ZNF774Q6NX45 483 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 KCNIP4Q6PIL6 250 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 CORO6Q6QEF8 472 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 CLEC2AQ6UVW9 174 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 TMEM64Q6YI46 380 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 C17orf107Q6ZR85 190 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 ANO5Q75V66 913 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 C16orf62Q7Z3J2 963 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 CDC20BQ86Y33 519 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 PTOV1Q86YD1 416 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 PSTKQ8IV42 348 aaKnown RBP2.01□□□□□ -2.09
SRP54-204ENST00000553923 ZNF444Q8N0Y2 327 aaPredicted RBP2.01□□□□□ -2.09
SRP54-204ENST00000553923 DCLK2Q8N568 766 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 LINC00612Q8N6U2 182 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 ZNF321PQ8N8H1 164 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 LRTM2Q8N967 370 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 DDHD1Q8NEL9 900 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 OR52K1Q8NGK4 314 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 ATP8B4Q8TF62 1192 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 RLN3Q8WXF3 142 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 IRGQQ8WZA9 623 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 TMEM45BQ96B21 275 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 RAB39BQ96DA2 213 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 MRPL53Q96EL3 112 aaKnown RBP2.01□□□□□ -2.09
SRP54-204ENST00000553923 ABHD8Q96I13 439 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 HPDLQ96IR7 371 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 RBM41Q96IZ5 413 aaKnown RBP2.01□□□□□ -2.09
SRP54-204ENST00000553923 RBM14Q96PK6 669 aaKnown RBP2.01□□□□□ -2.09
SRP54-204ENST00000553923 CCNL2Q96S94 520 aaPredicted RBP2.01□□□□□ -2.09
SRP54-204ENST00000553923 NDNQ99608 321 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 GPA33Q99795 319 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 PRMT1Q99873 361 aaKnown RBP2.01□□□□□ -2.09
SRP54-204ENST00000553923 SYT11Q9BT88 431 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 MCRIP2Q9BUT9 160 aaKnown RBP2.01□□□□□ -2.09
SRP54-204ENST00000553923 VN1R1Q9GZP7 353 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 SDCBP2Q9H190 292 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 ACTL8Q9H568 366 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 RPAP3Q9H6T3 665 aaPredicted RBP2.01□□□□□ -2.09
SRP54-204ENST00000553923 TLE6Q9H808 572 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 MEAF6Q9HAF1 191 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 KCNK13Q9HB14 408 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 A4GALTQ9NPC4 353 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 OLFML3Q9NRN5 406 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 ACOXLQ9NUZ1 547 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 RNF186Q9NXI6 227 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 HOXC10Q9NYD6 342 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 UTP6Q9NYH9 597 aaKnown RBP2.01□□□□□ -2.09
SRP54-204ENST00000553923 RNF14Q9UBS8 474 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 LRWD1Q9UFC0 647 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 LCMT1Q9UIC8 334 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 TEKT2Q9UIF3 430 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 PSME2Q9UL46 239 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 PLCL2Q9UPR0 1127 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms