RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 MYNNQ9NPC7 610 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 EHD3Q9NZN3 535 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 ZDHHC2Q9UIJ5 367 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 ERVK-11Q9UQG0 969 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 WBP11Q9Y2W2 641 aaKnown RBP17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 CCL27Q9Y4X3 112 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 HELZ2Q9BYK8 2649 aaKnown RBP17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 OR6C76A6NM76 312 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 A8MVJ9 347 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 HRKO00198 91 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 SLC25A12O75746 678 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 OR2J2O76002 312 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 RASAL1O95294 804 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 DDCP20711 480 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 MAPK1P28482 360 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 ARRB2P32121 409 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 SLC1A6P48664 564 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 ZNF750Q32MQ0 723 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 ZNF468Q5VIY5 522 aaPredicted RBP17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 HLA-DQA1Q5Y7H0 255 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 Q6ZSR9 355 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 IKBIPQ70UQ0 350 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 GPALPP1Q8IXQ4 340 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 VWA5B2Q8N398 1253 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 BCORP1Q8N888 145 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 OR2T11Q8NH01 316 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 SLC22A8Q8TCC7 542 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 C19orf60Q96EN9 201 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 BBS4Q96RK4 519 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 HPF1Q9NWY4 346 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 TMED5Q9Y3A6 229 aa17.15■□□□□ 0.34
PRPF40B-216ENST00000552301 LSM1O15116 133 aaKnown RBP17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 ITM2AO43736 263 aa17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 ATP1B1P05026 303 aa17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 H2AFXP16104 143 aaPredicted RBP17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 SSTR4P31391 388 aa17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 SLC18A1P54219 525 aa17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 MAPKAPK3Q16644 382 aa17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 UGT3A2Q3SY77 523 aa17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 ATP6AP1LQ52LC2 224 aa17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 SLC25A25Q6KCM7 469 aa17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 C16orf47Q6ZP98 133 aaPredicted RBP17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 TRIM42Q8IWZ5 723 aa17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 C9orf40Q8IXQ3 194 aa17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 GALNT11Q8NCW6 608 aa17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 GRHL3Q8TE85 626 aa17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 CNRIP1Q96F85 164 aaPredicted RBP17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 RASL10BQ96S79 203 aa17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 SLC35C2Q9NQQ7 365 aa17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 OLAHQ9NV23 265 aa17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 RAP2CQ9Y3L5 183 aa17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 PCDHGB6Q9Y5F9 930 aa17.14■□□□□ 0.33
PRPF40B-216ENST00000552301 NEURL1O76050 574 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 CRYABP02511 175 aaKnown RBP17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 NTSP30990 170 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 SLC37A1P57057 533 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 KCNC4Q03721 635 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 ELOAQ14241 798 aaKnown RBP17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 KIAA0040Q15053 153 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 MPEG1Q2M385 716 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 FAM71E1Q6IPT2 247 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 FAM180BQ6P0A1 224 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 OPN5Q6U736 354 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 TICAM1Q8IUC6 712 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 ZNF781Q8N8C0 355 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 OR7G1Q8NGA0 311 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 TUBGCP3Q96CW5 907 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 SCMH1Q96GD3 660 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 TRIM45Q9H8W5 580 aaPredicted RBP17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 TIMMDC1Q9NPL8 285 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 BCAP29Q9UHQ4 241 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 CFL2Q9Y281 166 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 NTNG1Q9Y2I2 539 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 KLF13Q9Y2Y9 288 aaPredicted RBP17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 SHANK1Q9Y566 2161 aa17.13■□□□□ 0.33
PRPF40B-216ENST00000552301 SVILO95425 2214 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 C2orf92A0A1B0GVN3 265 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 ATP6AP2A0A1C7CYW4 349 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 TMEM200CA6NKL6 621 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 PEX11AO75192 247 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 ATP6AP2O75787 350 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 SP1P08047 785 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 CT62P0C5K7 136 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 SOX3P41225 446 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 ASMTP46597 345 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 WDR4P57081 412 aaKnown RBP17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 BST1Q10588 318 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 FUT7Q11130 342 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 EBPQ15125 230 aaKnown RBP17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 PDCD2Q16342 344 aaPredicted RBP17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 XKR7Q5GH72 579 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 ATG16L1Q676U5 607 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 IL20RBQ6UXL0 311 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 GALNTL5Q7Z4T8 443 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 CCDC116Q8IYX3 515 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 FAM9CQ8IZT9 166 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 TAGAPQ8N103 731 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 ADCY4Q8NFM4 1077 aa17.12■□□□□ 0.33
PRPF40B-216ENST00000552301 FAR1Q8WVX9 515 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms